Stem-loop gma-MIR169h

Accession

MI0017912

Description

Glycine max gma-MIR169h precursor miRNA

Literature search

23 open access papers mention gma-MIR169h
(96 sentences)

Sequence

125801 reads, 782.0 reads per million, 178 experiments

gugcuuuUGAGCCAAGGAUGACUUGCCGGCguauguuugaucucuucuaggacuguugccggcgagacaucuuggcucauuggugcucucuuuccacucauaugagacucuagaaagagcuugauugaaaggaugauguccaauaauugug
(.(((....))))..((((........((((...((((((.....))..))))...))))...((((((((..........)))).))))..(((..(((...(((.((((....)))))))...)))..)))....))))..........

Structure

gugcuuuUGAGCCAA    GACUUGCCGGCguauguuugaucucuucuaggacuguugccggcgagacaucuuggcu 
               GGAU                                                          c
               ||||                                                           
               ccug                                                          a
-----guguuaauaa    uaguaggaaaguuaguucgagaaagaucucagaguauacucaccuuucucucgugguu 

Annotation confidence Not enough data

Genome context

chr9: 5330689-5330839 [+]

Mature gma-miR169h-3p

• Accession: MIMAT0021062
• Description: Glycine max gma-miR169h-3p mature miRNA
• Sequence: 8 - UGAGCCAAGGAUGACUUGCCGGC - 30
• Evidence: experimental ; SOLiD [1]

References

1. PubMed ID: 21751852
   Transcriptional analysis of soybean root response to Fusarium virguliforme, the causal agent of sudden death syndrome
   "Radwan O, Liu Y, Clough SJ"
   "Mol Plant Microbe Interact (2011) 24:958-972