Stem-loop gma-MIR1510b

Accession

MI0010575

Description

Glycine max gma-MIR1510b precursor miRNA

Literature search

16 open access papers mention gma-MIR1510b
(36 sentences)

Sequence

uuuauggaaguggAGGGAUAGGUAAAACAACUACUucuguaaaaguaauuguuauaguuaguUGUUGUUUUACCUAUUCCACCaauuccaucua
...((((((.(((.(((((((((((((((((.(((.((((((.........))))))..))).))))))))))))))))).))).))))))...

Structure

uuu      g   A                 U   -u      aag 
   auggaa ugg GGGAUAGGUAAAACAAC ACU  cuguaa   u
   |||||| ||| ||||||||||||||||| |||  ||||||   a
   uaccuu aCC CCUUAUCCAUUUUGUUG uga  gauauu   a
auc      a   A                 U   uu      guu 

Annotation confidence Not enough data

Genome context

chr2: 6675723-6675816 [+]

Mature gma-miR1510b-3p

• Accession: MIMAT0010082
• Description: Glycine max gma-miR1510b-3p mature miRNA
• Sequence: 63 - UGUUGUUUUACCUAUUCCACC - 83
• Evidence: experimental ; cloned [1], 454 [2], Illumina [3]

Mature gma-miR1510b-5p

• Accession: MIMAT0020939
• Description: Glycine max gma-miR1510b-5p mature miRNA
• Sequence: 14 - AGGGAUAGGUAAAACAACUACU - 35
• Evidence: experimental ; Illumina [3-4]

References

1. PubMed ID: 19084500
   Identification and expression analysis of miRNAs from nitrogen-fixing soybean nodules
   "Wang Y, Li P, Cao X, Wang X, Zhang A, Li X"
   "Biochem Biophys Res Commun (2009) 378:799-803


2. PubMed ID: 21663675
   Identification of novel soybean microRNAs involved in abiotic and biotic stresses
   Kulcheski FR, de Oliveira LF, Molina LG, Almerão MP, Rodrigues FA, Marcolino J, Barbosa JF, Stolf-Moreira R, Nepomuceno AL, Marcelino-Guimarães FC, Abdelnoor RV, Nascimento LC, Carazzolle MF, Pereira GA, Margis R
   BMC Genomics (2011) 12:307


3. PubMed ID: 21504877
   MicroRNAs in the shoot apical meristem of soybean
   "Wong CE, Zhao YT, Wang XJ, Croft L, Wang ZH, Haerizadeh F, Mattick JS, Singh MB, Carroll BJ, Bhalla PL"
   "J Exp Bot (2011) 62:2495-2506


4. PubMed ID: 22156213
   MicroRNAs as master regulators of the plant NB-LRR defense gene family via the production of phased, trans-acting siRNAs
   "Zhai J, Jeong DH, De Paoli E, Park S, Rosen BD, Li Y, Gonzalez AJ, Yan Z, Kitto SL, Grusak MA, Jackson SA, Stacey G, Cook DR, Green PJ, Sherrier DJ, Meyers BC"
   "Genes Dev (2011) 25:2540-2553