Stem-loop gma-MIR5373

Accession

MI0018629

Description

Glycine max gma-MIR5373 precursor miRNA

Literature search

1 open access papers mention gma-MIR5373
(1 sentences)

Sequence

203215 reads, 565.0 reads per million, 177 experiments

ucauagaguCUAGGCUCACGGGAAAGAAGauUCUCUUGAUUCUAGAUGAUGUuga
(((..(.(((((((.(((.(((((......))))).))).)))))))..)..)))

Structure

   ua -a       C   C     AG 
uca  g  guCUAGG UCA GGGAA  A
|||  |  ||||||| ||| |||||   
agu  U  UAGAUCU AGU CUCUu  A
   UG AG       U   U     aG 

Annotation confidence Low

Genome context

chr16: 28005409-28005463 [+]

Mature gma-miR5373-5p

• Accession: MIMAT0054226
• Description: Glycine max gma-miR5373-5p mature miRNA
• Sequence: 10 - CUAGGCUCACGGGAAAGAAG - 29
• Evidence: experimental ; unknown

Mature gma-miR5373-3p

• Accession: MIMAT0021611
• Description: Glycine max gma-miR5373-3p mature miRNA
• Sequence: 32 - UCUCUUGAUUCUAGAUGAUGU - 52
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 21663675
   Identification of novel soybean microRNAs involved in abiotic and biotic stresses
   Kulcheski FR, de Oliveira LF, Molina LG, Almerão MP, Rodrigues FA, Marcolino J, Barbosa JF, Stolf-Moreira R, Nepomuceno AL, Marcelino-Guimarães FC, Abdelnoor RV, Nascimento LC, Carazzolle MF, Pereira GA, Margis R
   BMC Genomics (2011) 12:307