Stem-loop gma-MIR156v

Accession

MI0021675

Description

Glycine max gma-MIR156v precursor miRNA

Literature search

39 open access papers mention gma-MIR156v
(155 sentences)

Sequence

1200227 reads, 2678.0 reads per million, 178 experiments

uaagggaggUGACAGAAGAGAGUGAGCACacauaauacuuucuuguaagauaaagauucaugcuugaaguuauguguGCUCACUCUCUAUCUGUCACCccacca
....((.(((((((((((((((((((((((((((((...(((..(((.((.......)).)))..))))))))))))))))))))))).)))))))))))....

Structure

uaag  a         -                    acu   uu   a  ua 
    gg ggUGACAGA AGAGAGUGAGCACacauaau   uuc  gua ga  a
    || ||||||||| ||||||||||||||||||||   |||  ||| ||  a
    cc CCACUGUCU UCUCUCACUCGuguguauug   aag  cgu cu  g
acca  -         A                    ---   uu   a  ua 

Annotation confidence High

Genome context

chr4: 4306348-4306451 [+]

Mature gma-miR156v-5p

• Accession: MIMAT0024881
• Description: Glycine max gma-miR156v-5p mature miRNA
• Sequence: 10 - UGACAGAAGAGAGUGAGCAC - 29
• Evidence: experimental ; Illumina [1]

Mature gma-miR156v-3p

• Accession: MIMAT0054364
• Description: Glycine max gma-miR156v-3p mature miRNA
• Sequence: 78 - GCUCACUCUCUAUCUGUCACC - 98
• Evidence: experimental ; unknown

References

1. PubMed ID: 22559273
   Genome organization and characteristics of soybean microRNAs
   Turner M, Yu O, Subramanian S
   BMC Genomics (2012) 13:169