Stem-loop gma-MIR1513c

Accession

MI0018683

Description

Glycine max gma-MIR1513c precursor miRNA

Literature search

2 open access papers mention gma-MIR1513c
(8 sentences)

Sequence

100907 reads, 185.0 reads per million, 174 experiments

gaucugauaUGAGAGAAAGCCAUGACUUACacacgcauugaaaucuaaguuaaauauguguguaaGUCAUGGCAUUAUCUCAUAUCuaauc
(((..(((((((((....(((((((((((((((((.(((.............))).)))))))))))))))))....)))))))))..)))

Structure

   cu         GAAA                 c   gaaau 
gau  gauaUGAGA    GCCAUGACUUACacacg auu     c
|||  |||||||||    ||||||||||||||||| |||     u
cua  CUAUACUCU    CGGUACUGaaugugugu uaa     a
   au         AUUA                 a   auuga 

Annotation confidence High

Genome context

chr17: 1395193-1395283 [-]

Mature gma-miR1513c-5p

• Accession: MIMAT0021674
• Description: Glycine max gma-miR1513c-5p mature miRNA
• Sequence: 10 - UGAGAGAAAGCCAUGACUUAC - 30
• Evidence: experimental ; Illumina [1]

Mature gma-miR1513c-3p

• Accession: MIMAT0054262
• Description: Glycine max gma-miR1513c-3p mature miRNA
• Sequence: 66 - GUCAUGGCAUUAUCUCAUAUC - 86
• Evidence: experimental ; unknown

References

1. PubMed ID: 21663675
   Identification of novel soybean microRNAs involved in abiotic and biotic stresses
   Kulcheski FR, de Oliveira LF, Molina LG, Almerão MP, Rodrigues FA, Marcolino J, Barbosa JF, Stolf-Moreira R, Nepomuceno AL, Marcelino-Guimarães FC, Abdelnoor RV, Nascimento LC, Carazzolle MF, Pereira GA, Margis R
   BMC Genomics (2011) 12:307