Stem-loop gma-MIR166p

Accession

MI0021692

Description

Glycine max gma-MIR166p precursor miRNA

Literature search

36 open access papers mention gma-MIR166p
(210 sentences)

Sequence

586830462 reads, 646561.0 reads per million, 178 experiments

aaaaguugaggGGAAUGUCAUCUGGUUCGAGAucauucauuuauucaauuagucucaaacacgaaaaugcggacccaguucuuuugugugauuUCGGACCAGGCUUCAUUCCCCUGagcuau
...((((.(((((((((...((((((((((((((........................((((((((..((.......))..))))))))))))))))))))))...))))))))).))))..

Structure

aaa    g         UCA              auucauuuauucaauuagucucaa        au  gg 
   aguu aggGGAAUG   UCUGGUUCGAGAuc                        acacgaaa  gc  a
   |||| |||||||||   ||||||||||||||                        ||||||||  ||  c
   ucga UCCCCUUAC   GGACCAGGCUuuag                        uguguuuu  ug  c
-ua    G         UUC              ------------------------        cu  ac 

Annotation confidence High

Genome context

chr3: 37501582-37501703 [-]

Mature gma-miR166p-5p

• Accession: MIMAT0054380
• Description: Glycine max gma-miR166p-5p mature miRNA
• Sequence: 12 - GGAAUGUCAUCUGGUUCGAGA - 32
• Evidence: experimental ; unknown

Mature gma-miR166p-3p

• Accession: MIMAT0024898
• Description: Glycine max gma-miR166p-3p mature miRNA
• Sequence: 94 - UCGGACCAGGCUUCAUUCCCCUG - 116
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22559273
   Genome organization and characteristics of soybean microRNAs
   Turner M, Yu O, Subramanian S
   BMC Genomics (2012) 13:169