Stem-loop gma-MIR5377

Accession

MI0018636

Description

Glycine max gma-MIR5377 precursor miRNA

Sequence

7701 reads, 25.0 reads per million, 172 experiments

gaccgucuuagaaugcucagcauucugcaaagguucuucaacAACCGUCGUAGAAUGUUGAGUUUUcuacaucgaucacaaCUGAAGGAUCGAUGUAGAAUGCUgagcauucuaagacgguc
(((((((((((((((((((((((((((((..(((((((((.....((..((((((.........))))))..))........)))))))))..)))))))))))))))))))))))))))))

Structure

                             aa         ---acAAC  UC      UGU 
gaccgucuuagaaugcucagcauucugca  gguucuuca        CG  GUAGAA   U
|||||||||||||||||||||||||||||  |||||||||        ||  ||||||   G
cuggcagaaucuuacgagUCGUAAGAUGU  CUAGGAAGU        gc  caucUU   A
                             AG         Caacacua  ua      UUG 

Annotation confidence Low

Genome context

chr2: 36745810-36745931 [+]

Mature gma-miR5377-5p

• Accession: MIMAT0054232
• Description: Glycine max gma-miR5377-5p mature miRNA
• Sequence: 43 - AACCGUCGUAGAAUGUUGAGUUUU - 66
• Evidence: experimental ; unknown

Mature gma-miR5377-3p

• Accession: MIMAT0021618
• Description: Glycine max gma-miR5377-3p mature miRNA
• Sequence: 82 - CUGAAGGAUCGAUGUAGAAUGCU - 104
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 21663675
   Identification of novel soybean microRNAs involved in abiotic and biotic stresses
   Kulcheski FR, de Oliveira LF, Molina LG, Almerão MP, Rodrigues FA, Marcolino J, Barbosa JF, Stolf-Moreira R, Nepomuceno AL, Marcelino-Guimarães FC, Abdelnoor RV, Nascimento LC, Carazzolle MF, Pereira GA, Margis R
   BMC Genomics (2011) 12:307