Stem-loop gma-MIR5371

Accession

MI0018627

Description

Glycine max gma-MIR5371 precursor miRNA

Literature search

1 open access papers mention gma-MIR5371
(1 sentences)

Sequence

gggaggccccuaguccucgaauucUAGGAAUUAGUCACUCAGAUCcuaaccucuuugguucuuucauugagauccaugguugagucuacucguuccaagccuaauauggacugcaucgaagaggccaucgcgaaacuuaccuccaaucaacucaaccucaucgcugcaaagauguuaggaUCUCAGUGACUAAUUUCUAGAauuugaggacuagggaccuccc
((((((.((((((((((((((((((((((((((((((((.((((((((((.(((((((.((((.....)))).)).(((.((((....))))..)))((((......)).))(((.(((.((((...............................)))).))).)))))))).)))))))))).)))))))))))))))))))))))))))))))).))))))

Structure

      c                                C          c     gguucuuucauugagauccaugguugagucuacucguuccaagccuaauauggacu   u   a    ccaucgcgaaacuu 
gggagg cccuaguccucgaauucUAGGAAUUAGUCACU AGAUCcuaac ucuuu                                                        gca cga gagg              a
|||||| |||||||||||||||||||||||||||||||| |||||||||| |||||                                                        ||| ||| ||||              c
cccucc gggaucaggaguuuaAGAUCUUUAAUCAGUGA UCUaggauug agaaa                                                        cgu gcu cucc              c
      a                                C          u     --------------------------------------------------------   c   a    aacucaacuaaccu 

Annotation confidence Not enough data

Genome context

chr15: 34072242-34072464 [+]

Mature gma-miR5371-5p

• Accession: MIMAT0021608
• Description: Glycine max gma-miR5371-5p mature miRNA
• Sequence: 25 - UAGGAAUUAGUCACUCAGAUC - 45
• Evidence: experimental ; Illumina [1]

Mature gma-miR5371-3p

• Accession: MIMAT0021609
• Description: Glycine max gma-miR5371-3p mature miRNA
• Sequence: 181 - UCUCAGUGACUAAUUUCUAGA - 201
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 21663675
   Identification of novel soybean microRNAs involved in abiotic and biotic stresses
   Kulcheski FR, de Oliveira LF, Molina LG, Almerão MP, Rodrigues FA, Marcolino J, Barbosa JF, Stolf-Moreira R, Nepomuceno AL, Marcelino-Guimarães FC, Abdelnoor RV, Nascimento LC, Carazzolle MF, Pereira GA, Margis R
   BMC Genomics (2011) 12:307