Stem-loop gma-MIR156q

Accession

MI0019748

Description

Glycine max gma-MIR156q precursor miRNA

Literature search

40 open access papers mention gma-MIR156q
(162 sentences)

Sequence

uuuguggaggUGACAGAAGAGAGUGAGCACUuggcucuuuccuagcauggaucuaaguucacgccaaaagccgugugcucucucucuaucugucaccaccuccuu
.....((.(((((((((((((((.((((((.(((((.(((....((.(((((....))))).)).)))))))).)))))).)))))).))))))))).)).....

Structure

uuugu  a         -      U      U     c   ccua  a     c 
     gg ggUGACAGA AGAGAG GAGCAC uggcu uuu    gc uggau u
     || ||||||||| |||||| |||||| ||||| |||    || |||||  
     cc ccacugucu ucucuc cucgug gccga aaa    cg acuug a
uuccu  a         a      u      u     -   ---c  c     a 

Annotation confidence Low

Genome context

chr13: 22074983-22075087 [+]

Mature gma-miR156q

• Accession: MIMAT0023203
• Description: Glycine max gma-miR156q mature miRNA
• Sequence: 11 - UGACAGAAGAGAGUGAGCACU - 31
• Evidence: experimental ; Illumina [1-2]

References

1. PubMed ID: 22156213
   MicroRNAs as master regulators of the plant NB-LRR defense gene family via the production of phased, trans-acting siRNAs
   "Zhai J, Jeong DH, De Paoli E, Park S, Rosen BD, Li Y, Gonzalez AJ, Yan Z, Kitto SL, Grusak MA, Jackson SA, Stacey G, Cook DR, Green PJ, Sherrier DJ, Meyers BC"
   "Genes Dev (2011) 25:2540-2553


2. PubMed ID: 24475082
   Systems and evolutionary characterization of microRNAs and their underlying regulatory networks in soybean cotyledons
   Goettel W, Liu Z, Xia J, Zhang W, Zhao PX, An YQ
   PLoS One (2014) 9:e86153