Stem-loop gma-MIR166r

Accession

MI0021694

Description

Glycine max gma-MIR166r precursor miRNA

Literature search

36 open access papers mention gma-MIR166r
(209 sentences)

Sequence

238902617 reads, 282193.0 reads per million, 178 experiments

cacgucuugaggGGAAUGCAGUGUGGUCCAAGGagaugauauaucacuucaccauacucauaucuucacaaacucaucagauucagauguaauaauaauuuguaauauaugcauauuaugucuccUCGGACCAGGCUUCAUUCCCUucaauuaca
......((((((((((((.(((.((((((.((((((((((((.................)))))..........((((.......)))).....(((((.((((.....)))).)))))))))))).)))))).))).)))))))))))).....

Structure

cacguc            C   G      A       gauauaucacuucaccauacucauaucuucacaaacucaucagauucagauguaaua     u    a 
      uugaggGGAAUG AGU UGGUCC AGGagau                                                         auaau ugua u
      |||||||||||| ||| |||||| |||||||                                                         ||||| |||| a
      aacuUCCCUUAC UCG ACCAGG Uccucug                                                         uauua acgu u
-acauu            U   G      C       ---------------------------------------------------------     u    a 

Annotation confidence High

Genome context

KQ474607.1: 1988-2142 [-]

Mature gma-miR166r-5p

• Accession: MIMAT0054382
• Description: Glycine max gma-miR166r-5p mature miRNA
• Sequence: 13 - GGAAUGCAGUGUGGUCCAAGG - 33
• Evidence: experimental ; unknown

Mature gma-miR166r-3p

• Accession: MIMAT0024900
• Description: Glycine max gma-miR166r-3p mature miRNA
• Sequence: 126 - UCGGACCAGGCUUCAUUCCCU - 146
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22559273
   Genome organization and characteristics of soybean microRNAs
   Turner M, Yu O, Subramanian S
   BMC Genomics (2012) 13:169