Stem-loop gma-MIR166s

Accession

MI0021695

Description

Glycine max gma-MIR166s precursor miRNA

Literature search

36 open access papers mention gma-MIR166s
(289 sentences)

Sequence

515381784 reads, 596097.0 reads per million, 178 experiments

aaugaggguguggGGAAUGUCGCCUUGGCUCGAGAgaucuauaugauaugauguguccaugcauucacuaaucaucaguuugugaguguuuucUCGGACCAGGCUUCAUUCCCCUcacucccuc
...(((((.((((((((((..((((.((.((((((((.......(((((...)))))...((((((((.(((.....))).)))))))))))))))).))))))..))))))))..)).)))))

Structure

aau     u  --        UC    U  C        ucuauaugauaugauguguccau        u   c 
   gaggg gu  ggGGAAUG  GCCU GG UCGAGAga                       gcauucac aau a
   ||||| ||  ||||||||  |||| || ||||||||                       |||||||| ||| u
   cuccc ca  CCCCUUAC  CGGA CC GGCUcuuu                       ugugagug uug c
---     u  cU        UU    -  A        -----------------------        u   a 

Annotation confidence High

Genome context

chr7: 10246809-10246932 [+]

Mature gma-miR166s-5p

• Accession: MIMAT0054383
• Description: Glycine max gma-miR166s-5p mature miRNA
• Sequence: 14 - GGAAUGUCGCCUUGGCUCGAGA - 35
• Evidence: experimental ; unknown

Mature gma-miR166s-3p

• Accession: MIMAT0024901
• Description: Glycine max gma-miR166s-3p mature miRNA
• Sequence: 94 - UCGGACCAGGCUUCAUUCCCCU - 115
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22559273
   Genome organization and characteristics of soybean microRNAs
   Turner M, Yu O, Subramanian S
   BMC Genomics (2012) 13:169