Stem-loop gma-MIR5376

Accession

MI0018635

Description

Glycine max gma-MIR5376 precursor miRNA

Literature search

1 open access papers mention gma-MIR5376
(1 sentences)

Sequence

56898 reads, 177.0 reads per million, 177 experiments

UGAAGAUUUGAAGAAUUUGGGAgaaggacgccgucaaggucgaggguuucgugacuacagcuucugaagcacgucaucuucacauaaauaagacgcguuucagaaguuguagucacgaaacucucgaccuagaccgcagcccuucucCCAAAUUCUUCAAAUCUUCA
(((((((((((((((((((((((((((.(((.(((.((((((((((((((((((((((((((((((((((.((((................)))).)))))))))))))))))))))))))))))))))).))).)).).)))))))))))))))))))))))))))

Structure

                           a -  c   a                                  a    aucuuca 
UGAAGAUUUGAAGAAUUUGGGAgaagg c gc guc aggucgaggguuucgugacuacagcuucugaagc cguc       c
||||||||||||||||||||||||||| | || ||| |||||||||||||||||||||||||||||||||| ||||        
ACUUCUAAACUUCUUAAACCcucuucc g cg cag uccagcucucaaagcacugauguugaagacuuug gcag       a
                           c a  c   a                                  c    aauaaau 

Annotation confidence High

Genome context

Unknown

Mature gma-miR5376-5p

• Accession: MIMAT0021617
• Description: Glycine max gma-miR5376-5p mature miRNA
• Sequence: 1 - UGAAGAUUUGAAGAAUUUGGGA - 22
• Evidence: experimental ; Illumina [1]

Mature gma-miR5376-3p

• Accession: MIMAT0054231
• Description: Glycine max gma-miR5376-3p mature miRNA
• Sequence: 148 - CCAAAUUCUUCAAAUCUUCA - 167
• Evidence: experimental ; unknown

References

1. PubMed ID: 21663675
   Identification of novel soybean microRNAs involved in abiotic and biotic stresses
   Kulcheski FR, de Oliveira LF, Molina LG, Almerão MP, Rodrigues FA, Marcolino J, Barbosa JF, Stolf-Moreira R, Nepomuceno AL, Marcelino-Guimarães FC, Abdelnoor RV, Nascimento LC, Carazzolle MF, Pereira GA, Margis R
   BMC Genomics (2011) 12:307