Stem-loop gma-MIR166f

Accession

MI0017832

Description

Glycine max gma-MIR166f precursor miRNA

Literature search

36 open access papers mention gma-MIR166f
(210 sentences)

Sequence

412491192 reads, 505004.0 reads per million, 178 experiments

augaaggaguugaggGGAAUGGUGUCUGGUUCGAGACcauucuucugaagcaaagaucaucaucacccuugagaaugaucUCGGACCAGGCUUCAUUCCCCcuagcucaa
......((((((.(((((((((.(((((((((((((.(((((((...(((....(((....)))...)))))))))).))))))))))))).))))))))).))))))..

Structure

augaag      a         U             C       cug   caaa   c 
      gaguug ggGGAAUGG GUCUGGUUCGAGA cauucuu   aag    gau a
      |||||| ||||||||| ||||||||||||| |||||||   |||    |||  
      cucgau CCCCUUACU CGGACCAGGCUcu guaagag   uuc    cua u
----aa      c         U             a       ---   -cca   c 

Annotation confidence High

Genome context

chr10: 41798829-41798938 [+]

Mature gma-miR166f-5p

• Accession: MIMAT0054177
• Description: Glycine max gma-miR166f-5p mature miRNA
• Sequence: 16 - GGAAUGGUGUCUGGUUCGAGAC - 37
• Evidence: experimental ; unknown

Mature gma-miR166f-3p

• Accession: MIMAT0020981
• Description: Glycine max gma-miR166f-3p mature miRNA
• Sequence: 81 - UCGGACCAGGCUUCAUUCCCC - 101
• Evidence: experimental ; 454 [1]

References

1. PubMed ID: 21504877
   MicroRNAs in the shoot apical meristem of soybean
   "Wong CE, Zhao YT, Wang XJ, Croft L, Wang ZH, Haerizadeh F, Mattick JS, Singh MB, Carroll BJ, Bhalla PL"
   "J Exp Bot (2011) 62:2495-2506