Stem-loop gma-MIR156y

Accession

MI0021678

Description

Glycine max gma-MIR156y precursor miRNA

Literature search

39 open access papers mention gma-MIR156y
(155 sentences)

Sequence

1207739 reads, 2697.0 reads per million, 178 experiments

uaagggaggUGACAGAAGAGAGUGAGCACacauaguacuuucuugaaugauauaagguuucaugcuugaaguuaugcguGCUUACUCUCUAUCUGUCACCCaucac
...((..((((((((((((((((((((((.(((((...((((..(.((((.........)))).)..))))))))).))))))))))))).)))))))))..))..

Structure

uaa  ga         -             a     uac    uu a    uau 
   gg  ggUGACAGA AGAGAGUGAGCAC cauag   uuuc  g auga   a
   ||  ||||||||| ||||||||||||| |||||   ||||  | ||||   a
   cu  CCACUGUCU UCUCUCAUUCGug guauu   gaag  c uacu   g
-ca  aC         A             c     ---    uu g    uug 

Annotation confidence High

Genome context

chr17: 38139717-38139822 [-]

Mature gma-miR156y-5p

• Accession: MIMAT0024884
• Description: Glycine max gma-miR156y-5p mature miRNA
• Sequence: 10 - UGACAGAAGAGAGUGAGCAC - 29
• Evidence: experimental ; Illumina [1]

Mature gma-miR156y-3p

• Accession: MIMAT0054367
• Description: Glycine max gma-miR156y-3p mature miRNA
• Sequence: 80 - GCUUACUCUCUAUCUGUCACCC - 101
• Evidence: experimental ; unknown

References

1. PubMed ID: 22559273
   Genome organization and characteristics of soybean microRNAs
   Turner M, Yu O, Subramanian S
   BMC Genomics (2012) 13:169