Stem-loop gma-MIR5369

Accession

MI0018622

Description

Glycine max gma-MIR5369 precursor miRNA

Sequence

2615 reads, 17.0 reads per million, 174 experiments

agcugaaucuuuuuuuucugagagcaugaucccaugcuggUUGGCUAUCUCAAAGAAUUGAugcaacaauuuuuuaugagaggcaauaucuuuUGAGAAAAGGAGGAUGUCAucu
((.((((((((((((((((.((((((((....)))))).((((.((.((..(((((((((......)))))))))..)).)).)))).....)).))))))))))))).))).))

Structure

  c   -             g  agcaugaucccaugcug    G  A  UC         Au 
ag uga aucuuuuuuuucu ag                 gUUG CU UC  AAAGAAUUG  g
|| ||| ||||||||||||| ||                 |||| || ||  |||||||||   
uc ACU UAGGAGGAAAAGA Uu                 uaac ga ag  uuuuuuaac  c
  u   G             G  ------------uucua    g  g  ua         aa 

Annotation confidence Low

Genome context

chr11: 16004196-16004310 [-]

Mature gma-miR5369-5p

• Accession: MIMAT0054220
• Description: Glycine max gma-miR5369-5p mature miRNA
• Sequence: 41 - UUGGCUAUCUCAAAGAAUUGA - 61
• Evidence: experimental ; unknown

Mature gma-miR5369-3p

• Accession: MIMAT0021603
• Description: Glycine max gma-miR5369-3p mature miRNA
• Sequence: 94 - UGAGAAAAGGAGGAUGUCA - 112
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 21663675
   Identification of novel soybean microRNAs involved in abiotic and biotic stresses
   Kulcheski FR, de Oliveira LF, Molina LG, Almerão MP, Rodrigues FA, Marcolino J, Barbosa JF, Stolf-Moreira R, Nepomuceno AL, Marcelino-Guimarães FC, Abdelnoor RV, Nascimento LC, Carazzolle MF, Pereira GA, Margis R
   BMC Genomics (2011) 12:307