Stem-loop gma-MIR395f

Accession

MI0019790

Description

Glycine max gma-MIR395f precursor miRNA

Literature search

15 open access papers mention gma-MIR395f
(71 sentences)

Sequence

gcugucucuuggaguuccucugagcacuucacgcguggggcuaguucuauucaauauuaccauuuagauagaauaguccucaucacugaaaUGAAGUGUUUGGGGGAACUUUuggguacaac
..((((((..(((((((((((((((((((((((.(((((((((.(((((((.((.........)).))))))))))))).)))...))...))))))))))))))))))))).))).)))..

Structure

gc   -   uu                     ---  --c   -      g       c  uau 
  ugu cuc  ggaguuccucugagcacuuca   cg   gug gggcua uucuauu aa   u
  ||| |||  |||||||||||||||||||||   ||   ||| |||||| ||||||| ||   a
  aca ggg  UUUCAAGGGGGUUUGUGAAGU   gu   uac ccugau aagauag uu   c
ca   u   -u                     aaa  cac   u      -       a  uac 

Annotation confidence Not enough data

Genome context

chr8: 41439069-41439190 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from gma-MIR395f

Mature gma-miR395f

• Accession: MIMAT0023245
• Description: Glycine max gma-miR395f mature miRNA
• Sequence: 92 - UGAAGUGUUUGGGGGAACUUU - 112
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22156213
   MicroRNAs as master regulators of the plant NB-LRR defense gene family via the production of phased, trans-acting siRNAs
   "Zhai J, Jeong DH, De Paoli E, Park S, Rosen BD, Li Y, Gonzalez AJ, Yan Z, Kitto SL, Grusak MA, Jackson SA, Stacey G, Cook DR, Green PJ, Sherrier DJ, Meyers BC"
   "Genes Dev (2011) 25:2540-2553