Stem-loop gma-MIR156u

Accession

MI0021674

Description

Glycine max gma-MIR156u precursor miRNA

Literature search

39 open access papers mention gma-MIR156u
(155 sentences)

Sequence

1283871 reads, 2987.0 reads per million, 178 experiments

gagagaggcUGACAGAAGAGAGUGAGCACauacuaguggagauuguaugagggcauacaauugcgggugcguGCUCACUUCUCUAUCUGUCAGCuuccca
..(.(((((((((((((((((((((((((.((((.((...(((((((((....))))))))))).)))).)))))))).))))).)))))))))))).).

Structure

ga a            -     -        a    a  gga         a 
  g gaggcUGACAGA AGAGA GUGAGCAC uacu gu   gauuguaug g
  | |||||||||||| ||||| |||||||| |||| ||   |||||||||  
  c cuuCGACUGUCU UCUCU CACUCGug gugg cg   uuaacauac g
-a c            A     U        c    g  ---         g 

Annotation confidence High

Genome context

chr2: 38792955-38793054 [+]

Mature gma-miR156u-5p

• Accession: MIMAT0024880
• Description: Glycine max gma-miR156u-5p mature miRNA
• Sequence: 10 - UGACAGAAGAGAGUGAGCAC - 29
• Evidence: experimental ; Illumina [1]

Mature gma-miR156u-3p

• Accession: MIMAT0054363
• Description: Glycine max gma-miR156u-3p mature miRNA
• Sequence: 73 - GCUCACUUCUCUAUCUGUCAGC - 94
• Evidence: experimental ; unknown

References

1. PubMed ID: 22559273
   Genome organization and characteristics of soybean microRNAs
   Turner M, Yu O, Subramanian S
   BMC Genomics (2012) 13:169