Stem-loop gma-MIR5038b

Accession

MI0018630

Description

Glycine max gma-MIR5038b precursor miRNA

Sequence

93554 reads, 158.0 reads per million, 171 experiments

cuUGAGAAUUUGGCCUCUGUCCAugucuaauuauuaauuccaauaauucagAUGGACAGAGCCCAAAUUCUCAAG
(((((((((((((.(((((((((..((((((((((......))))))).)))))))))))).)))))))))))))

Structure

             C         ug   -       aa 
cuUGAGAAUUUGG CUCUGUCCA  ucu aauuauu  u
||||||||||||| |||||||||  ||| |||||||   
GAACUCUUAAACC GAGACAGGU  Aga uuaauaa  u
             C         --   c       cc 

Annotation confidence High

Genome context

Unknown

Mature gma-miR5038b-5p

• Accession: MIMAT0021612
• Description: Glycine max gma-miR5038b-5p mature miRNA
• Sequence: 3 - UGAGAAUUUGGCCUCUGUCCA - 23
• Evidence: experimental ; Illumina [1]

Mature gma-miR5038b-3p

• Accession: MIMAT0054227
• Description: Glycine max gma-miR5038b-3p mature miRNA
• Sequence: 52 - AUGGACAGAGCCCAAAUUCUCAAG - 75
• Evidence: experimental ; unknown

References

1. PubMed ID: 21663675
   Identification of novel soybean microRNAs involved in abiotic and biotic stresses
   Kulcheski FR, de Oliveira LF, Molina LG, Almerão MP, Rodrigues FA, Marcolino J, Barbosa JF, Stolf-Moreira R, Nepomuceno AL, Marcelino-Guimarães FC, Abdelnoor RV, Nascimento LC, Carazzolle MF, Pereira GA, Margis R
   BMC Genomics (2011) 12:307