Stem-loop gma-MIR169m

Accession

MI0018665

Description

Glycine max gma-MIR169m precursor miRNA

Literature search

24 open access papers mention gma-MIR169m
(99 sentences)

Sequence

gaaaguagagugCAGCCAAGGAUGACUUGCCGGagcaauaagcaauaauaucuaucuauuuuaucuuucuuuucuucuuauucuuucacgccggcaaguuguucuuggcuacauuuuguuuuc
((((((((((((.((((((((((((((((((((......(((.(((((.............................)))))))).....)))))))))))))))))))).))))))))))))

Structure

            C                    agcaau   c     uaucuaucuauuu 
gaaaguagagug AGCCAAGGAUGACUUGCCGG      aag aauaa             u
|||||||||||| ||||||||||||||||||||      ||| |||||             a
cuuuuguuuuac ucgguucuuguugaacggcc      uuc uuauu             u
            a                    -gcacu   -     cuucuuuucuuuc 

Annotation confidence Not enough data

Genome context

chr13: 21492366-21492488 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from gma-MIR169m

Mature gma-miR169m

• Accession: MIMAT0021653
• Description: Glycine max gma-miR169m mature miRNA
• Sequence: 13 - CAGCCAAGGAUGACUUGCCGG - 33
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 21663675
   Identification of novel soybean microRNAs involved in abiotic and biotic stresses
   Kulcheski FR, de Oliveira LF, Molina LG, Almerão MP, Rodrigues FA, Marcolino J, Barbosa JF, Stolf-Moreira R, Nepomuceno AL, Marcelino-Guimarães FC, Abdelnoor RV, Nascimento LC, Carazzolle MF, Pereira GA, Margis R
   BMC Genomics (2011) 12:307