Stem-loop gma-MIR156r

Accession

MI0019757

Description

Glycine max gma-MIR156r precursor miRNA

Literature search

40 open access papers mention gma-MIR156r
(169 sentences)

Sequence

uuguuaauugcuuuuuucucuucuaguuauaugggguucgugaucauaauaugaugacaauccuaaugcauaauauucuuucguauuuuaugcagagagagugaaggaucaagcacaugcauaagauagagccugCUGACAGAAGAUAGAGAGCAUagcugaacau
..((((..((((((((..((((((.((((....((((((((.(((((...))))).))....((.((((((..(((((((((((((...)))).))))))))).............)))))).))...))))))..)))))))))).)))))))))))).......

Structure

-----uu    au        uc      a    uaug      gugaucauaauaugaugacaauc  a      -----------aa         -    u 
       guua  ugcuuuuu  ucuucu guua    ggguuc                       cu augcau             uauucuuuc guau  
       ||||  ||||||||  |||||| ||||    ||||||                       || ||||||             ||||||||| |||| u
       cgaU  ACGAGAGA  AGAAGA CAGU    uccgag                       ga uacgua             gugagagag cgua  
uacaagu    --        -U      -    --Cg      --------------------aua  a      cacgaacuaggaa         a    u 

Annotation confidence Not enough data

Genome context

chr16: 6633951-6634116 [+]

Mature gma-miR156r

• Accession: MIMAT0023212
• Description: Glycine max gma-miR156r mature miRNA
• Sequence: 136 - CUGACAGAAGAUAGAGAGCAU - 156
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22156213
   MicroRNAs as master regulators of the plant NB-LRR defense gene family via the production of phased, trans-acting siRNAs
   "Zhai J, Jeong DH, De Paoli E, Park S, Rosen BD, Li Y, Gonzalez AJ, Yan Z, Kitto SL, Grusak MA, Jackson SA, Stacey G, Cook DR, Green PJ, Sherrier DJ, Meyers BC"
   "Genes Dev (2011) 25:2540-2553