Dead hairpin entry

Stem-loop gma-MIR1520d

Accession

MI0007233

Description

Glycine max gma-MIR1520d precursor miRNA

Comment

The pattern of deep sequencing reads mapping to this locus does not support its annotation as a microRNA.

Literature search

10 open access papers mention gma-MIR1520d
(18 sentences)

Sequence

73624 reads, 155.0 reads per million, 178 experiments

augaugacuaucaCAUGUCAUGUUCUGAUUGgauguuaacucuaugaaaaaacaaauacauuguuguuuucauugaucAAUCAGAACAUGACACGUGACAauuaucaucca
(((((((...((((.(((((((((((((((((........((.((((((((((((.....))))).))))))).))))))))))))))))))).))))...)))))))...

Structure

---       cua    A                 auguuaac  u       -     a 
   augauga   ucaC UGUCAUGUUCUGAUUGg        uc augaaaa aacaa u
   |||||||   |||| |||||||||||||||||        || ||||||| ||||| a
   uacuauu   AGUG ACAGUACAAGACUAAcu        ag uacuuuu uuguu c
acc       aAC    C                 --------  u       g     a