Stem-loop gma-MIR159d

Accession

MI0016581

Description

Glycine max gma-MIR159d precursor miRNA

Literature search

24 open access papers mention gma-MIR159d
(84 sentences)

Sequence

324211 reads, 986.0 reads per million, 178 experiments

gggugaauugAGCUGCUUAGCUAUGGAUCCCacaguucuacccaucaauaagugcuuuugugguagucuuguggCUUCCAUAUCUGGGGAGCUUcauuugccu
((((((((.(((((.(((((.((((((..((((((..(((((((..............)).)))))..))))))..)))))).))))).))))).))))))))

Structure

        u     G     C      UC      uu     -  ucaaua 
gggugaau gAGCU CUUAG UAUGGA  CCacag  cuacc ca      a
|||||||| ||||| ||||| ||||||  ||||||  ||||| ||       
uccguuua UUCGA GGGUC AUACCU  gguguu  gaugg gu      g
        c     G     U      UC      cu     u  uuucgu 

Annotation confidence High

Genome context

Unknown

Mature gma-miR159d-5p

• Accession: MIMAT0018340
• Description: Glycine max gma-miR159d-5p mature miRNA
• Sequence: 11 - AGCUGCUUAGCUAUGGAUCCC - 31
• Evidence: experimental ; Illumina [1]

Mature gma-miR159d-3p

• Accession: MIMAT0054162
• Description: Glycine max gma-miR159d-3p mature miRNA
• Sequence: 75 - CUUCCAUAUCUGGGGAGCUU - 94
• Evidence: experimental ; unknown

References

1. PubMed ID: 20122185
   Prediction of novel miRNAs and associated target genes in Glycine max
   Joshi T, Yan Z, Libault M, Jeong DH, Park S, Green PJ, Sherrier DJ, Farmer A, May G, Meyers BC, Xu D, Stacey G
   BMC Bioinformatics (2010) 11:S14