Stem-loop gma-MIR395l

Accession

MI0021718

Description

Glycine max gma-MIR395l precursor miRNA

Literature search

15 open access papers mention gma-MIR395l
(68 sentences)

Sequence

98894 reads, 266.0 reads per million, 162 experiments

uuuucuguuggcuguccuuuggAGUUCCUCUGAACGCUUCAUGuuagugagggggguagccaguguaaacuggacugguacccauuauuauaagccuucuuAUGAAGUGUUUGGGGGAACUCuuggguucaacu
......(((((...(((...(((((((((((((((((((((((.....((((((((((.(((((.((...)).))))))))))...........))))).))))))))))))))))))))))).))).))))).

Structure

uuuucu     cug   uuu                       uuagu     -----------     g     g  a 
      guugg   ucc   ggAGUUCCUCUGAACGCUUCAUG     gaggg           gggua ccagu ua  
      |||||   |||   |||||||||||||||||||||||     |||||           ||||| ||||| || a
      caacu   ggg   uCUCAAGGGGGUUUGUGAAGUAu     cuucc           cccau gguca gu  
-----u     --u   --u                       ----u     gaauauuauua     -     g  c 

Annotation confidence High

Genome context

chr2: 1760207-1760340 [+]

Mature gma-miR395l-5p

• Accession: MIMAT0054404
• Description: Glycine max gma-miR395l-5p mature miRNA
• Sequence: 23 - AGUUCCUCUGAACGCUUCAUG - 43
• Evidence: experimental ; unknown

Mature gma-miR395l-3p

• Accession: MIMAT0024924
• Description: Glycine max gma-miR395l-3p mature miRNA
• Sequence: 102 - AUGAAGUGUUUGGGGGAACUC - 122
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22559273
   Genome organization and characteristics of soybean microRNAs
   Turner M, Yu O, Subramanian S
   BMC Genomics (2012) 13:169