Stem-loop gma-MIR171l

Accession

MI0018687

Description

Glycine max gma-MIR171l precursor miRNA

Literature search

15 open access papers mention gma-MIR171l
(36 sentences)

Sequence

gagaaagCGAUGUUGGUGAGGUUCAAUCcgaagacggauuuacauguagaagcaguaaaauacgaucucagauugagccgcgccaauaucacuuuauc
...((((.((((((((((.(((((((((.((.((((..(((((.(((....))))))))...)).)))).))))))))).)))))))))).))))...

Structure

gag    C          A         c  a  -  -ga     a   a 
   aaag GAUGUUGGUG GGUUCAAUC ga ga cg   uuuac ugu g
   |||| |||||||||| ||||||||| || || ||   ||||| |||  
   uuuc cuauaaccgc ccgaguuag cu cu gc   aaaug acg a
cua    a          g         a  -  a  aua     -   a 

Annotation confidence Not enough data

Genome context

chr17: 8830894-8830991 [-]

Mature gma-miR171l

• Accession: MIMAT0021678
• Description: Glycine max gma-miR171l mature miRNA
• Sequence: 8 - CGAUGUUGGUGAGGUUCAAUC - 28
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 21663675
   Identification of novel soybean microRNAs involved in abiotic and biotic stresses
   Kulcheski FR, de Oliveira LF, Molina LG, Almerão MP, Rodrigues FA, Marcolino J, Barbosa JF, Stolf-Moreira R, Nepomuceno AL, Marcelino-Guimarães FC, Abdelnoor RV, Nascimento LC, Carazzolle MF, Pereira GA, Margis R
   BMC Genomics (2011) 12:307