Stem-loop gma-MIR156p

Accession

MI0019741

Description

Glycine max gma-MIR156p precursor miRNA

Literature search

39 open access papers mention gma-MIR156p
(157 sentences)

Sequence

3177 reads, 18.0 reads per million, 153 experiments

cuuugggagaUUGACAGAAGAAAGGGAGCACaugcugcaauuauaucaacacauaccuuugccgugCGUGCUCUCUUUUCUUCCUGUCAaucucgaauca
......(((((((((((((((((((((((((.(((.((((...(((......)))...)))).))).)))))).)))))))).)))))))))))......

Structure

cuuugg           -        -      a   u    uua   ca 
      gagaUUGACAG AAGAAAGG GAGCAC ugc gcaa   uau  a
      ||||||||||| |||||||| |||||| ||| ||||   |||   
      cucuaACUGUC UUCUUUUC CUCGUG gug cguu   aua  c
acuaag           C        U      C   c    ucc   ca 

Annotation confidence Medium

Genome context

chr11: 462200-462299 [-]

Mature gma-miR156p-5p

• Accession: MIMAT0023196
• Description: Glycine max gma-miR156p-5p mature miRNA
• Sequence: 11 - UUGACAGAAGAAAGGGAGCAC - 31
• Evidence: experimental ; Illumina [1]

Mature gma-miR156p-3p

• Accession: MIMAT0054313
• Description: Glycine max gma-miR156p-3p mature miRNA
• Sequence: 67 - CGUGCUCUCUUUUCUUCCUGUCA - 89
• Evidence: experimental ; unknown

References

1. PubMed ID: 22156213
   MicroRNAs as master regulators of the plant NB-LRR defense gene family via the production of phased, trans-acting siRNAs
   "Zhai J, Jeong DH, De Paoli E, Park S, Rosen BD, Li Y, Gonzalez AJ, Yan Z, Kitto SL, Grusak MA, Jackson SA, Stacey G, Cook DR, Green PJ, Sherrier DJ, Meyers BC"
   "Genes Dev (2011) 25:2540-2553