miRBase entry: gma-MIR5378

Dead hairpin entry

Stem-loop gma-MIR5378


Accession
MI0018637
Description
Glycine max gma-MIR5378 precursor miRNA
Comment
The pattern of deep sequencing reads mapping to this locus does not support its annotation as a microRNA.


Sequence

6997 reads, 44.0 reads per million, 173 experiments
ccuaaaauuauuuguaauauuuguguucuauccuucaaaugacuuccucaauaauaaacuUCGGACUUUGGUAUACAAAGAAaaaacuauaaaccaaauuuaugguaaaguccgaaguuaccaaauaauguuuaccauaaauuugguuuauaguuuuuucuuuguauaccaaaguccgaaauuuauuauugaggaaguCAUCUGAAGGAUAGAACACAUAuauuacaaauaauuuuagg
((((((((((((((((((((.((((((((((((((((.((((((((((((((((((((.((((((((((((((((((((((((((((((((((((((((((((((((((.....................)))))))))))))))))))))))))))))))))))))))))))))))))).)))))))))))))))))))).)))))))))))))))).))))))))))))))))))))

Structure
                    u                a                    c                                                  guccgaagu 
ccuaaaauuauuuguaauau uguguucuauccuuca augacuuccucaauaauaaa uUCGGACUUUGGUAUACAAAGAAaaaacuauaaaccaaauuuaugguaaa         u
|||||||||||||||||||| |||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||         a
ggauuuuaauaaacauuauA ACACAAGAUAGGAAGU UACugaaggaguuauuauuu aagccugaaaccauauguuucuuuuuugauauuugguuuaaauaccauuu         c
                    U                C                    a                                                  guaauaaac