Stem-loop gma-MIR169d

Accession

MI0016571

Description

Glycine max gma-MIR169d precursor miRNA

Literature search

24 open access papers mention gma-MIR169d
(114 sentences)

Sequence

agauuaguggaugUGAGCCAAGGAUGACUUGCCGGUuguauaauagcacccgguuuaaguccuucuugguucuuauuuacuauucuua
(((.(((((((((.((((((((((.((((((((((.(((......))).)))))..))))).)))))))))).))))))))).)))..

Structure

--   u         U          U     --     U   au 
  aga uaguggaug GAGCCAAGGA GACUU  GCCGG ugu  a
  ||| ||||||||| |||||||||| |||||  ||||| |||   
  ucu aucauuuau cuugguucuu cugaa  uggcc acg  a
au   u         u          c     uu     c   au 

Annotation confidence Not enough data

Genome context

chr15: 14186946-14187033 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from gma-MIR169d

Mature gma-miR169d

• Accession: MIMAT0018330
• Description: Glycine max gma-miR169d mature miRNA
• Sequence: 14 - UGAGCCAAGGAUGACUUGCCGGU - 36
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 20122185
   Prediction of novel miRNAs and associated target genes in Glycine max
   Joshi T, Yan Z, Libault M, Jeong DH, Park S, Green PJ, Sherrier DJ, Farmer A, May G, Meyers BC, Xu D, Stacey G
   BMC Bioinformatics (2010) 11:S14