Stem-loop gma-MIR156x

Accession

MI0021677

Description

Glycine max gma-MIR156x precursor miRNA

Literature search

39 open access papers mention gma-MIR156x
(156 sentences)

Sequence

1224528 reads, 2776.0 reads per million, 178 experiments

ggguaagagaggUGACAGAAGAGAGUGAGCACacaugguauuuucuuggaugauauaagauuucaugcuugaaacuaugcguGCUCAUUCUCUAUCUGUCACCCaucaucau
......((..((((((((((((((((((((((.((((((...(((..(.((((.........)))).)..))))))))).))))))))))))).)))))))))..)).....

Structure

ggguaa  ga         -             a      auu   uu g    uau 
      ga  ggUGACAGA AGAGAGUGAGCAC cauggu   uuc  g auga   a
      ||  ||||||||| ||||||||||||| ||||||   |||  | ||||   a
      cu  CCACUGUCU UCUCUUACUCGug guauca   aag  c uacu   g
-uacua  aC         A             c      ---   uu g    uua 

Annotation confidence High

Genome context

chr14: 9223981-9224092 [+]

Mature gma-miR156x-5p

• Accession: MIMAT0024883
• Description: Glycine max gma-miR156x-5p mature miRNA
• Sequence: 13 - UGACAGAAGAGAGUGAGCAC - 32
• Evidence: experimental ; Illumina [1]

Mature gma-miR156x-3p

• Accession: MIMAT0054366
• Description: Glycine max gma-miR156x-3p mature miRNA
• Sequence: 83 - GCUCAUUCUCUAUCUGUCACCC - 104
• Evidence: experimental ; unknown

References

1. PubMed ID: 22559273
   Genome organization and characteristics of soybean microRNAs
   Turner M, Yu O, Subramanian S
   BMC Genomics (2012) 13:169