Stem-loop gma-MIR156m

Accession

MI0018654

Description

Glycine max gma-MIR156m precursor miRNA

Literature search

40 open access papers mention gma-MIR156m
(156 sentences)

Sequence

741957 reads, 1625.0 reads per million, 178 experiments

aggguugUUGACAGAAGAUAGAGAGCACagauagugauaugcauaaaaauauggaacgggaaagcaauugcaucucacuccuuuguGCUCUCUAGGCUUCUGUCAUCCacaccuu
.((((((.(((((((((.(((((((((((((.(((((.(((((.........................))))).)))))..)))))))))))))..)))))))))..)).)))).

Structure

a    -  -U         -A             -u     u     uaaaaauaugg 
 gggu ug  UGACAGAAG  UAGAGAGCACaga  aguga augca           a
 |||| ||  |||||||||  |||||||||||||  ||||| |||||           a
 ucca aC  ACUGUCUUC  AUCUCUCGuguuu  ucacu uacgu           c
u    c  CU         GG             cc     c     uaacgaaaggg 

Annotation confidence High

Genome context

chr9: 40437756-40437870 [-]

Mature gma-miR156m-5p

• Accession: MIMAT0021637
• Description: Glycine max gma-miR156m-5p mature miRNA
• Sequence: 8 - UUGACAGAAGAUAGAGAGCAC - 28
• Evidence: experimental ; Illumina [1]

Mature gma-miR156m-3p

• Accession: MIMAT0054245
• Description: Glycine max gma-miR156m-3p mature miRNA
• Sequence: 87 - GCUCUCUAGGCUUCUGUCAUCC - 108
• Evidence: experimental ; unknown

References

1. PubMed ID: 21663675
   Identification of novel soybean microRNAs involved in abiotic and biotic stresses
   Kulcheski FR, de Oliveira LF, Molina LG, Almerão MP, Rodrigues FA, Marcolino J, Barbosa JF, Stolf-Moreira R, Nepomuceno AL, Marcelino-Guimarães FC, Abdelnoor RV, Nascimento LC, Carazzolle MF, Pereira GA, Margis R
   BMC Genomics (2011) 12:307