Stem-loop gma-MIR156g

Accession

MI0016580

Description

Glycine max gma-MIR156g precursor miRNA

Literature search

40 open access papers mention gma-MIR156g
(161 sentences)

Sequence

369732 reads, 999.0 reads per million, 178 experiments

ugaacaauaucuugaacaguuugUUGACAGAAGAUAGAGAGCACaggugaucauacccaaaaaagcuuuugugugugagcaguuuuguGCUCUCUAUCUUCUGUCAAUGuacuucuca
............(((..(((.((((((((((((((((((((((((((((.((((((.(((((....))))).)))))).))..)))))))))))))))))))))))))).)))..)))

Structure

ugaacaauaucu   ac   u                          --  a      c     a 
            uga  agu ugUUGACAGAAGAUAGAGAGCACagg  ug ucauac caaaa a
            |||  ||| ||||||||||||||||||||||||||  || |||||| |||||  
            acu  uca GUAACUGUCUUCUAUCUCUCGuguuu  ac agugug guuuu g
------------   cu   u                          ug  g      u     c 

Annotation confidence High

Genome context

chr19: 8868796-8868913 [-]

Mature gma-miR156g-5p

• Accession: MIMAT0018339
• Description: Glycine max gma-miR156g-5p mature miRNA
• Sequence: 24 - UUGACAGAAGAUAGAGAGCAC - 44
• Evidence: experimental ; Illumina [1-2]

Mature gma-miR156g-3p

• Accession: MIMAT0054161
• Description: Glycine max gma-miR156g-3p mature miRNA
• Sequence: 89 - GCUCUCUAUCUUCUGUCAAUG - 109
• Evidence: experimental ; unknown

References

1. PubMed ID: 20122185
   Prediction of novel miRNAs and associated target genes in Glycine max
   Joshi T, Yan Z, Libault M, Jeong DH, Park S, Green PJ, Sherrier DJ, Farmer A, May G, Meyers BC, Xu D, Stacey G
   BMC Bioinformatics (2010) 11:S14


2. PubMed ID: 24475082
   Systems and evolutionary characterization of microRNAs and their underlying regulatory networks in soybean cotyledons
   Goettel W, Liu Z, Xia J, Zhang W, Zhao PX, An YQ
   PLoS One (2014) 9:e86153