Stem-loop gma-MIR156w

Accession

MI0021676

Description

Glycine max gma-MIR156w precursor miRNA

Literature search

39 open access papers mention gma-MIR156w
(156 sentences)

Sequence

1203244 reads, 2685.0 reads per million, 178 experiments

cuaagggagaUGACAGAAGAGAGUGAGCACacaugguauuuucuugcacgaugacgauucaugcuugaagcuauguguGCUUACUCUCUAUCUGUCAUCCcaucac
.....((.(((((((((((((((((((((((((((((...(((..(((.((.......)).)))..))))))))))))))))))))))).))))))))))).....

Structure

cuaag  a         -                    auu   uu   c  ug 
     gg gaUGACAGA AGAGAGUGAGCACacauggu   uuc  gca ga  a
     || ||||||||| ||||||||||||||||||||   |||  ||| ||  c
     cC CUACUGUCU UCUCUCAUUCGuguguaucg   aag  cgu cu  g
cacua  -         A                    ---   uu   a  ua 

Annotation confidence High

Genome context

chr6: 4047089-4047194 [+]

Mature gma-miR156w-5p

• Accession: MIMAT0024882
• Description: Glycine max gma-miR156w-5p mature miRNA
• Sequence: 11 - UGACAGAAGAGAGUGAGCAC - 30
• Evidence: experimental ; Illumina [1]

Mature gma-miR156w-3p

• Accession: MIMAT0054365
• Description: Glycine max gma-miR156w-3p mature miRNA
• Sequence: 79 - GCUUACUCUCUAUCUGUCAUCC - 100
• Evidence: experimental ; unknown

References

1. PubMed ID: 22559273
   Genome organization and characteristics of soybean microRNAs
   Turner M, Yu O, Subramanian S
   BMC Genomics (2012) 13:169