Stem-loop sequence gma-MIR396g

Accession

MI0017921 (change log)

Description

Glycine max miR396g stem-loop

Gene family

MIPF0000047; MIR396

Literature search

25 open access papers mention gma-MIR396g
(142 sentences)

Stem-loop

   augcugugugugugagaucugagcucaauuuuccucucaaguccug      c                   a     uau  aucuuauaucucuc 
5'                                               gucaug uuuuccacagcuuucuuga cuucu   gc              c
                                                 |||||| ||||||||||||||||||| |||||   ||              a
3'                                               cgguau agagggugucgaaagaacu gaaga   cg              c
   ----------------------------------------------      a                   c     ucc  aauuuuacgaccuu 

Confidence

Annotation confidence: not enough data

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Database links

• miRBase Tracker:MI0017921

Mature sequence gma-miR396g

• Accession: MIMAT0021071
• Sequence: 66 - uucuugaacuucuuaugcauc - 86
• Evidence: experimental; SOLiD [1], Illumina [2]

References

1. PMID:21751852 "Transcriptional analysis of soybean root response to Fusarium virguliforme, the causal agent of sudden death syndrome" Radwan O, Liu Y, Clough SJ Mol Plant Microbe Interact. 24:958-972(2011).
2. PMID:21663675 "Identification of novel soybean microRNAs involved in abiotic and biotic stresses" Kulcheski FR, de Oliveira LF, Molina LG, Almerao MP, Rodrigues FA, Marcolino J, Barbosa JF, Stolf-Moreira R, Nepomuceno AL, Marcelino-Guimaraes FC, Abdelnoor RV, Nascimento LC, Carazzolle MF, Pereira GA, Margis R BMC Genomics. 12:307(2011).