Stem-loop sequence tae-MIR5086

AccessionMI0017949 (change log)
DescriptionTriticum aestivum miR5086 stem-loop
Literature search

1 open access papers mention tae-MIR5086
(1 sentences)

   a a a                  g    -gu       c        u     g        acu 
5'  c c aaaucacauugguggaag cgug   aaagaaa aaaaucga gcuuc aaaauguu   u
    | | |||||||||||||||||| ||||   ||||||| |||||||| ||||| ||||||||   a
3'  g g uuuaguguaaccaccuuc gcac   uuuuuuu uuuuagcu ugagg uuuuacga   c
   c c c                  a    guu       u        u     -        aaa 
Get sequence
Deep sequencing
793 reads, 0 reads per million, 115 experiments
Confidence Annotation confidence: not enough data
Feedback: Do you believe this miRNA is real?

This is a predicted homolog of a miRNA identified by Illumina deep sequencing in barley (Hordeum vulgare) [1].

Genome context
Coordinates Overlapping transcripts
1D: 106288641-106288771 [-]
Database links

Mature sequence tae-miR5086

Accession MIMAT0020558

11 - 


 - 31

Get sequence
Deep sequencing473 reads, 114 experiments
Evidence not experimental


PMID:21352554 "Discovery of barley miRNAs through deep sequencing of short reads" Schreiber AW, Shi BJ, Huang CY, Langridge P, Baumann U BMC Genomics. 12:129(2011).