Accession
MI0017950
Description
Oryza sativa
osa-MIR5074 precursor miRNA
Literature search
4 open access papers mention osa-MIR5074
(5 sentences)
(5 sentences)
Sequence
5
reads,
1
reads per million, 2 experiments
cgucauucggGAAGGCCACCGUCGGGAUCGCcaagucgucgccguccccguccgccgcuucgccgucgccgaagaucgccggagcaccgucgccgccgucgacccgaucuccgccgccgcuucuuccucgucgccg
.......(((((((((...((.((((((((....((((.((.((....((..((..((((((.((((......)).)).))))))..)).)).)).)).)))).))))).))).))..))..))))).))......
.......(((((((((...((.((((((((....((((.((.((....((..((..((((((.((((......)).)).))))))..)).)).)).)).)))).))))).))).))..))..))))).))......
Structure
cgucauu - -- CAC U - Ccaa u c uccc uc cc c - gc
cg gGAAG GC CG CGG GAUCG gucg cg cg cg cg gcuucg cg uc c
|| ||||| || || ||| ||||| |||| || || || || |||||| || ||
gc ccuuc cg gc gcc cuagc cagc gc gc gc gc cgaggc gc ag g
-gccgcu u uu -cc c u ---c u c ---c -u ca c u aa
Annotation confidence
Not enough data
Do you think this miRNA is real?
Comments
This is a predicted homolog of a miRNA identified by Illumina deep sequencing in barley (Hordeum vulgare) [1].
Genome context
Chr12: 12674516-12674651 [+]
Database links
Mature osa-miR5074
| Accession | MIMAT0020559 |
| Description | Oryza sativa osa-miR5074 mature miRNA |
| Sequence | 11 - GAAGGCCACCGUCGGGAUCGC - 31 |
| Evidence | not_experimental |
| Database links |
|
References
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