Stem-loop sequence bdi-MIR5201

AccessionMI0018233 (change log)
DescriptionBrachypodium distachyon miR5201 stem-loop
Stem-loop 
       c            c         g        c    ucc 
5' cacu ugaucauuugcc cgucuugua cacugaca gugg   a
   |||| |||||||||||| ||||||||| |||||||| ||||    
3' guga acuaguaaacgg gcgggacau gugacugu cacc   u
       a            a         a        a    ccg
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Confidence Annotation confidence: not enough data
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Genome context
Coordinates (Bd21; GCA_000005505.1) Overlapping transcripts
2: 42461428-42461517 [-]
intergenic
Database links

Mature sequence bdi-miR5201-5p

Accession MIMAT0027098
Sequence

6 -  

ugaucauuugccccgucuugu

 - 26

Get sequence
Evidence experimental; Illumina [2]

Mature sequence bdi-miR5201-3p

Accession MIMAT0020758
Sequence

67 -  

agggcgaggcaaaugaucaaa

 - 87

Get sequence
Evidence experimental; Illumina [1-2]

References

1
PMID:19772667 "Deep sequencing of Brachypodium small RNAs at the global genome level identifies microRNAs involved in cold stress response" Zhang J, Xu Y, Huan Q, Chong K BMC Genomics. 10:449(2009).
2
PMID:23264558 "Addressing the role of microRNAs in reprogramming leaf growth during drought stress in Brachypodium distachyon" Bertolini E, Verelst W, Horner DS, Gianfranceschi L, Piccolo V, Inze D, Pe ME, Mica E Mol Plant. 6:423-443(2013).