miRBase entry: gma-MIR5372

Stem-loop gma-MIR5372


Accession
MI0018628
Description
Glycine max gma-MIR5372 precursor miRNA

Literature search
2 open access papers mention gma-MIR5372
(5 sentences)

Sequence

uugcauggUUGUUCGAUAAAACUGUUGUGauaauguacaacacaauuaucgauagcuuaugcaaa
((((((((((((.((((((...(((((((......)))))))...))))))))))).))))))).

Structure
-       -     U      AAC       au 
 uugcaug gUUGU CGAUAA   UGUUGUG  a
 ||||||| ||||| ||||||   |||||||   
 aacguau cgaua gcuauu   acaacau  a
a       u     -      aac       gu 


Annotation confidence Not enough data
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Genome context
chr16: 5771324-5771388 [-]
Clustered miRNAs
1 other miRNA is < 10 kb from gma-MIR5372
Name Accession Chromosome Start End Strand Confidence




Database links

Mature gma-miR5372

Accession MIMAT0021610
Description Glycine max gma-miR5372 mature miRNA
Sequence 9 - UUGUUCGAUAAAACUGUUGUG - 29
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 21663675
    Identification of novel soybean microRNAs involved in abiotic and biotic stresses
    Kulcheski FR, de Oliveira LF, Molina LG, Almerão MP, Rodrigues FA, Marcolino J, Barbosa JF, Stolf-Moreira R, Nepomuceno AL, Marcelino-Guimarães FC, Abdelnoor RV, Nascimento LC, Carazzolle MF, Pereira GA, Margis R
    BMC Genomics (2011) 12:307