miRBase entry: gma-MIR5038b

Stem-loop gma-MIR5038b


Accession
MI0018630
Description
Glycine max gma-MIR5038b precursor miRNA
Gene family
MIPF0001368; MIR5038


Sequence

cuUGAGAAUUUGGCCUCUGUCCAugucuaauuauuaauuccaauaauucagauggacagagcccaaauucucaag
(((((((((((((.(((((((((..((((((((((......))))))).)))))))))))).)))))))))))))

Structure
             C         ug   -       aa 
cuUGAGAAUUUGG CUCUGUCCA  ucu aauuauu  u
||||||||||||| |||||||||  ||| |||||||   
gaacucuuaaacc gagacaggu  aga uuaauaa  u
             c         --   c       cc 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
Unknown

Database links

Mature gma-miR5038b

Accession MIMAT0021612
Description Glycine max gma-miR5038b mature miRNA
Sequence 3 - UGAGAAUUUGGCCUCUGUCCA - 23
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 21663675
    Identification of novel soybean microRNAs involved in abiotic and biotic stresses
    Kulcheski FR, de Oliveira LF, Molina LG, Almerão MP, Rodrigues FA, Marcolino J, Barbosa JF, Stolf-Moreira R, Nepomuceno AL, Marcelino-Guimarães FC, Abdelnoor RV, Nascimento LC, Carazzolle MF, Pereira GA, Margis R
    BMC Genomics (2011) 12:307