Stem-loop gma-MIR156o

Accession

MI0018656

Description

Glycine max gma-MIR156o precursor miRNA

Literature search

39 open access papers mention gma-MIR156o
(156 sentences)

Sequence

4246116 reads, 7926.0 reads per million, 178 experiments

aaaUUGACAGAAGAGAGUGAGCACaaagaggcacuugauauaaaucuauaucacugcuuuuguguGCUCACUACUCUUUCUGUCGGUUUU
(((((((((((((((((((((((((.(((((((..(((((((....))))))).))))))).)))))))))).))).)))))))))))).

Structure

-            -   -          a       cu       a 
 aaaUUGACAGAA GAG AGUGAGCACa agaggca  ugauaua a
 |||||||||||| ||| |||||||||| |||||||  |||||||  
 UUUGGCUGUCUU CUC UCACUCGugu uuuucgu  acuauau u
U            U   A          g       -c       c 

Annotation confidence High

Genome context

chr17: 37469976-37470065 [+]

Mature gma-miR156o-5p

• Accession: MIMAT0021639
• Description: Glycine max gma-miR156o-5p mature miRNA
• Sequence: 4 - UUGACAGAAGAGAGUGAGCAC - 24
• Evidence: experimental ; Illumina [1-2]

Mature gma-miR156o-3p

• Accession: MIMAT0054247
• Description: Glycine max gma-miR156o-3p mature miRNA
• Sequence: 66 - GCUCACUACUCUUUCUGUCGGUUUU - 90
• Evidence: experimental ; unknown

References

1. PubMed ID: 21663675
   Identification of novel soybean microRNAs involved in abiotic and biotic stresses
   Kulcheski FR, de Oliveira LF, Molina LG, Almerão MP, Rodrigues FA, Marcolino J, Barbosa JF, Stolf-Moreira R, Nepomuceno AL, Marcelino-Guimarães FC, Abdelnoor RV, Nascimento LC, Carazzolle MF, Pereira GA, Margis R
   BMC Genomics (2011) 12:307


2. PubMed ID: 24475082
   Systems and evolutionary characterization of microRNAs and their underlying regulatory networks in soybean cotyledons
   Goettel W, Liu Z, Xia J, Zhang W, Zhao PX, An YQ
   PLoS One (2014) 9:e86153