miRBase entry: hsa-mir-548at

Stem-loop hsa-mir-548at


Accession
MI0019137
Symbol
HGNC: MIR548AT
Description
Homo sapiens hsa-mir-548at precursor miRNA
Gene family
MIPF0000317; mir-548

Literature search
56 open access papers mention hsa-mir-548at
(170 sentences)

Sequence

114 reads, 25 reads per million, 28 experiments
AAAAGUUAUUGCGGUUUUGGCUgccaaaagaaauggcCAAAACCGCAGUAACUUUUGU
((((((((((((((((((((((............))))))))))))))))))))))..

Structure
--                      gccaa 
  AAAAGUUAUUGCGGUUUUGGCU     a
  ||||||||||||||||||||||      
  UUUUCAAUGACGCCAAAACcgg     a
UG                      uaaag 


Annotation confidence High
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Genome context
chr17: 42494773-42494830 [+]

Disease association
hsa-mir-548at is associated with one or more human diseases in the Human microRNA Disease Database
Disease Description Category PubMed ID


Database links

Mature hsa-miR-548at-5p

Accession MIMAT0022277
Description Homo sapiens hsa-miR-548at-5p mature miRNA
Sequence 1 - AAAAGUUAUUGCGGUUUUGGCU - 22
Evidence experimental
Illumina [2]

Mature hsa-miR-548at-3p

Accession MIMAT0022278
Description Homo sapiens hsa-miR-548at-3p mature miRNA
Sequence 38 - CAAAACCGCAGUAACUUUUGU - 58
Evidence experimental
Illumina [2]

References

  1. PubMed ID: 21911355
    miRDeep2 accurately identifies known and hundreds of novel microRNA genes in seven animal clades
    "Friedlander MR, Mackowiak SD, Li N, Chen W, Rajewsky N"
    "Nucleic Acids Res (2012) 40:37-52

  2. PubMed ID: 21980368
    MicroRNAs associated with metastatic prostate cancer
    Watahiki A, Wang Y, Morris J, Dennis K, O'Dwyer HM, Gleave M, Gout PW, Wang Y
    PLoS One (2011) 6:e24950