Stem-loop cel-mir-5594

Accession

MI0019157

Description

Caenorhabditis elegans cel-mir-5594 precursor miRNA

Sequence

346 reads, 9 reads per million, 14 experiments

AAGAGUACUGUAGUUUCAAAAUuucauugauuaaaauUUUGAACUACAGUACUCUUCA
(((((((((((((((.((((((((.........)))))))))))))))))))))))..

Structure

--               U        cau 
  AAGAGUACUGUAGUU CAAAAUuu   u
  ||||||||||||||| ||||||||   g
  UUCUCAUGACAUCAA GUUUuaaa   a
AC               -        auu 

Annotation confidence High

Genome context

chrII: 11865130-11865187 [-]

Mature cel-miR-5594-5p

• Accession: MIMAT0022309
• Description: Caenorhabditis elegans cel-miR-5594-5p mature miRNA
• Sequence: 1 - AAGAGUACUGUAGUUUCAAAAU - 22
• Evidence: not_experimental

Mature cel-miR-5594-3p

• Accession: MIMAT0022310
• Description: Caenorhabditis elegans cel-miR-5594-3p mature miRNA
• Sequence: 38 - UUUGAACUACAGUACUCUUCA - 58
• Evidence: not_experimental

References

1. PubMed ID: 21911355
   miRDeep2 accurately identifies known and hundreds of novel microRNA genes in seven animal clades
   "Friedlander MR, Mackowiak SD, Li N, Chen W, Rajewsky N"
   "Nucleic Acids Res (2012) 40:37-52