miRBase entry: mmu-mir-5625

Stem-loop mmu-mir-5625


Accession
MI0019194
Symbol
MGI: Mir5625
Description
Mus musculus mmu-mir-5625 precursor miRNA


Sequence

27 reads, 6 reads per million, 21 experiments
CCCGGAAGUUCUUGAGUAGGAgacuccacaucccgggugacccggguuggagcugCUGAUUCAAGUGGUCUCUCGUGUCC
..(((.((..(((((((((.((.(((((...((((((...)))))).))))))).)).)))))))....)).))).....

Structure
---CC   A  --UU       -  G  a     cau      u 
     CGG AG    CUUGAGU AG Ag cucca   cccggg  
     ||| ||    ||||||| || || |||||   |||||| g
     GCU UC    GAACUUA UC uc gaggu   gggccc  
CCUGU   C  UGGU       G  g  -     --u      a 


Annotation confidence Not enough data
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Genome context
chr5: 30647936-30648015 [+]

Database links

Mature mmu-miR-5625-5p

Accession MIMAT0022379
Description Mus musculus mmu-miR-5625-5p mature miRNA
Sequence 1 - CCCGGAAGUUCUUGAGUAGGA - 21
Evidence not_experimental

Mature mmu-miR-5625-3p

Accession MIMAT0022380
Description Mus musculus mmu-miR-5625-3p mature miRNA
Sequence 56 - CUGAUUCAAGUGGUCUCUCGUGUCC - 80
Evidence not_experimental

References

  1. PubMed ID: 21911355
    miRDeep2 accurately identifies known and hundreds of novel microRNA genes in seven animal clades
    "Friedlander MR, Mackowiak SD, Li N, Chen W, Rajewsky N"
    "Nucleic Acids Res (2012) 40:37-52