miRBase entry: gma-MIR5670a

Stem-loop gma-MIR5670a


Accession
MI0019264
Description
Glycine max gma-MIR5670a precursor miRNA
Gene family
MIPF0001978; MIR5670

Literature search
1 open access papers mention gma-MIR5670a
(2 sentences)

Sequence

uuggaguuuccaugaaacaaauaugguaugauguaagggaaacauaaaaaccaaaguuagucgauuauaggguucaacuaacaucaguuuugauguuuccuuuaCAUCAUACCAUAUUUGCUUCAUagaaacuaca
....((((((.(((((.((((((((((((((((((((((((((((.(((((....((((((.((.........)).))))))....))))).)))))))))))))))))))))))))))).))))).))))))...

Structure
uugg      c     a                            a     caaa      c  uua 
    aguuuc augaa caaauaugguaugauguaagggaaacau aaaac    guuagu ga   u
    |||||| ||||| |||||||||||||||||||||||||||| |||||    |||||| ||   a
    ucaaag UACUU GUUUAUACCAUACUACauuuccuuugua uuuug    caauca cu   g
-aca      a     C                            g     acua      a  ugg 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
chr1: 6401527-6401662 [+]

Database links

Mature gma-miR5670a

Accession MIMAT0022452
Description Glycine max gma-miR5670a mature miRNA
Sequence 105 - CAUCAUACCAUAUUUGCUUCAU - 126
Evidence experimental
Illumina [1], RT-PCR [1]

References

  1. PubMed ID: 21219599
    Identification of miRNAs and their target genes in developing soybean seeds by deep sequencing
    Song QX, Liu YF, Hu XY, Zhang WK, Ma B, Chen SY, Zhang JS
    BMC Plant Biol (2011) 11:5