miRBase entry: 21219599

Identification of miRNAs and their target genes in developing soybean seeds by deep sequencing

PubMed ID 21219599
Authors Song QX, Liu YF, Hu XY, Zhang WK, Ma B, Chen SY, Zhang JS
Journal BMC Plant Biol
Volume 11
Pages 5

There are 265 miRNAs associated with this paper:
Name Accession RPM Chromosome Start End Strand Confidence
gma-MIR5667 MI0019261 None chr7 5379134 5379221 - -
gma-MIR5668 MI0019262 None chr16 29347569 29347681 + -
gma-MIR5669 MI0019263 None chr2 41839111 41839181 + -
gma-MIR5670a MI0019264 None chr1 6401527 6401662 + -
gma-MIR5671a MI0019265 None chr11 27953059 27953177 - -
gma-MIR5672 MI0019266 None chr5 11809060 11809192 - -
gma-MIR5037d MI0019267 None chr8 47682569 47682674 + -
gma-MIR5673 MI0019268 None chr1 39450461 39450567 + -
gma-MIR2111a MI0019269 None chr1 33084345 33084452 + -
gma-MIR1512c MI0019270 None chr2 8698923 8699026 - -
gma-MIR5674a MI0019271 None chr9 39974819 39975026 - -
gma-MIR5675 MI0019272 None chr11 70226 70476 + -
gma-MIR4401b MI0019273 None chr10 14391631 14391732 + -
gma-MIR5676 MI0019274 None chr8 27954774 27954919 - -
gma-MIR530b MI0019275 None chr13 41761036 41761186 - -
gma-MIR4387e MI0019276 None chr3 23234500 23234621 + -
gma-MIR5677 MI0019277 None chr2 14817220 14817443 - -
gma-MIR5678 MI0019278 None chr14 6867862 6868103 + -
gma-MIR5679 MI0019279 None chr8 25692576 25692654 - -
osa-MIR156a MI0000653 257272 Chr1 22524147 22524246 - -
osa-MIR156b MI0000654 258339 Chr1 4666341 4666516 + High
osa-MIR156c MI0000655 258287 Chr1 4665975 4666123 + High
osa-MIR156d MI0000656 375099 Chr2 4512884 4513012 - -
osa-MIR156e MI0000657 257257 Chr4 25026327 25026430 - -
osa-MIR156f MI0000658 374943 Chr8 21478230 21478415 + High
osa-MIR156g MI0000659 258296 Chr9 15065253 15065368 + High
osa-MIR156h MI0000660 374943 Chr8 21491232 21491417 + High
osa-MIR156i MI0000661 257274 Chr2 24119995 24120084 - -
osa-MIR156j MI0000662 374978 Chr6 26554795 26554959 + High
osa-MIR160a MI0000663 392 Chr2 3511585 3511672 - High
osa-MIR160b MI0000664 392 Chr6 28081020 28081158 + High
osa-MIR160c MI0000665 321 Chr8 1707568 1707666 + High
osa-MIR160d MI0000666 299 Chr3 32454988 32455129 + -
osa-MIR164a MI0000668 1892 Chr7 28523341 28523496 - -
osa-MIR164b MI0000669 1921 Chr5 15896163 15896271 - -
osa-MIR166a MI0000670 19323 Chr10 19987135 19987279 + High
osa-MIR166b MI0000671 19371 Chr6 30327084 30327289 - High
osa-MIR166c MI0000672 19151 Chr3 3487788 3487912 + High
osa-MIR166d MI0000673 19377 Chr2 26130059 26130183 + High
osa-MIR166e MI0000674 36 Chr3 765724 765860 + -
osa-MIR166f MI0000675 19281 Chr10 14483290 14483396 - -
osa-MIR167a MI0000676 55831 Chr12 25476808 25476948 + High
osa-MIR167b MI0000677 55818 Chr3 30546928 30547090 - -
osa-MIR167c MI0000678 55830 Chr3 33130619 33130781 + -
osa-MIR169a MI0000679 3953 Chr1 8729104 8729276 + -
osa-MIR396a MI0001046 97 Chr2 34280384 34280537 + -
osa-MIR396b MI0001047 100 Chr6 3669649 3669764 + -
osa-MIR396c MI0001048 280 Chr2 34287873 34288013 - High
osa-MIR398a MI0001051 11 Chr10 9216250 9216364 - -
osa-MIR398b MI0001052 59 Chr7 14598617 14598704 - -
osa-MIR156k MI0001090 871 Chr9 18289107 18289212 - -
osa-MIR156l MI0001091 10220 Chr5 5230609 5230764 + High
osa-MIR159a MI0001092 1717 Chr1 17681923 17682194 + -
osa-MIR159b MI0001093 1371 Chr1 1215030 1215217 + -
osa-MIR159c MI0001094 62 Chr1 6556048 6556244 - -
osa-MIR159d MI0001095 44 Chr1 6563756 6563944 - -
osa-MIR159e MI0001096 46 Chr1 9760708 9760898 - -
osa-MIR159f MI0001097 83 Chr1 6693112 6693299 + -
osa-MIR160e MI0001100 284 Chr7 2216761 2216874 - -
osa-MIR160f MI0001101 73 Chr8 24396882 24396981 + -
osa-MIR164c MI0001103 8 Chr5 17327440 17327558 + -
osa-MIR164d MI0001104 2213 Chr2 33143567 33143660 - -
osa-MIR164e MI0001105 1894 Chr3 10542157 10542288 + -
osa-MIR166k MI0001107 1477 Chr2 32435003 32435129 - High
osa-MIR166l MI0001108 1522 Chr9 16951817 16951933 + High
osa-MIR167d MI0001109 56522 Chr7 4166295 4166404 - -
osa-MIR167e MI0001110 56102 Chr2 3742241 3742513 - High
osa-MIR167f MI0001111 56422 Chr10 14723044 14723156 - -
osa-MIR167g MI0001112 56505 Chr3 3347682 3347763 + High
osa-MIR167h MI0001113 56418 Chr12 25480618 25480737 + -
osa-MIR167i MI0001114 56192 Chr6 27674749 27674949 + High
osa-MIR168a MI0001115 282915 Chr2 1553154 1553240 - High
osa-MIR168b MI0001116 1 Chr2 27336428 27336533 + -
osa-MIR169b MI0001117 3267 Chr6 27295908 27296035 - -
osa-MIR169c MI0001118 3454 Chr4 30712338 30712449 - -
osa-MIR169d MI0001119 1 Chr9 14620382 14620484 - -
osa-MIR169e MI0001120 804 Chr2 31205866 31205997 - -
osa-MIR169f MI0001121 845 Chr2 18558299 18558512 - -
osa-MIR169g MI0001122 1008 Chr4 19420077 19420202 + -
osa-MIR169h MI0001123 1003 Chr8 26807349 26807470 + -
osa-MIR169i MI0001124 1053 Chr8 26803116 26803291 + High
osa-MIR169j MI0001125 1011 Chr9 19788861 19788985 + -
osa-MIR169k MI0001126 1016 Chr9 19792133 19792288 + -
osa-MIR169l MI0001127 1003 Chr8 26817488 26817595 + -
osa-MIR169m MI0001128 1012 Chr8 26813897 26814034 + -
osa-MIR169n MI0001129 82 Chr11 6085252 6085428 - -
osa-MIR169o MI0001130 82 Chr11 6081528 6081700 - -
osa-MIR169p MI0001131 0 Chr8 7641327 7641452 - -
osa-MIR169q MI0001132 None Chr8 26817488 26817595 - -
osa-MIR172a MI0001139 3477 Chr9 22881834 22881942 + -
osa-MIR172b MI0001140 201 Chr1 42923736 42923973 - -
osa-MIR172c MI0001141 199 Chr7 13111485 13111595 - -
osa-MIR166g MI0001142 19256 Chr12 18329367 18329511 + -
osa-MIR166h MI0001143 17849 Chr2 32435174 32435292 - High
osa-MIR166i MI0001144 443 Chr3 25294953 25295097 + -
osa-MIR172d MI0001154 3505 Chr2 35143537 35143666 - High
osa-MIR167j MI0001156 56523 Chr1 32686068 32686227 - -
osa-MIR166m MI0001157 17946 Chr8 23045356 23045555 + -
osa-MIR166j MI0001158 19511 None None -
osa-MIR164f MI0001159 1904 Chr5 23343908 23344117 + -
osa-MIR396e MI0001703 1338 Chr4 34436820 34437003 + High
gma-MIR156d MI0001770 None chr8 3896578 3896728 + -
gma-MIR156e MI0001771 None chr18 57144436 57144559 - -
gma-MIR156c MI0001772 None chr16 5359989 5360173 - -
gma-MIR159a MI0001773 None chr9 40266722 40266935 + -
gma-MIR160a MI0001774 None chr10 44431708 44431826 - -
gma-MIR166a MI0001775 None chr16 1934911 1935056 - -
gma-MIR166b MI0001776 None chr8 282785 282951 - -
gma-MIR167a MI0001777 None chr19 42073549 42073667 + -
gma-MIR167b MI0001778 None chr2 14838068 14838188 - -
gma-MIR168a MI0001779 None chr9 44068673 44068797 - -
gma-MIR172a MI0001780 None chr12 6139598 6139756 - -
gma-MIR172b MI0001781 None chr13 41847312 41847464 - -
gma-MIR156a MI0001784 None chr17 5885507 5885628 - -
gma-MIR396a MI0001785 None chr13 27525230 27525369 - -
gma-MIR396b MI0001786 None chr13 27517027 27517152 + -
gma-MIR398a MI0001787 None chr1 7214749 7214864 - -
gma-MIR398b MI0001788 None chr2 11080996 11081130 - -
gma-MIR156b MI0001790 None chr14 992155 992274 + -
gma-MIR169a MI0001791 None chr9 38336014 38336134 + -
osa-MIR169r MI0006973 69 Chr3 35782416 35782544 + High
gma-MIR159b MI0007206 None chr7 5424789 5424974 - -
gma-MIR159c MI0007207 None chr16 2830034 2830218 - -
gma-MIR164a MI0007209 None chr19 49681250 49681344 + -
gma-MIR167c MI0007210 None chr7 39734580 39734954 + -
gma-MIR169b MI0007211 None chr2 10504688 10504870 + -
gma-MIR169c MI0007212 None chr9 5343659 5343773 + -
gma-MIR1514a MI0007226 None chr7 43120760 43120858 - -
gma-MIR1514b MI0007227 None chr17 1491521 1491629 + -
gma-MIR1536 MI0007234 None chr15 44547119 44547359 - -
gma-MIR1530 MI0007249 None chr10 41788173 41788321 + -
osa-MIR396f MI0010563 1410 Chr2 35636546 35636721 - High
gma-MIR167d MI0010571 None chr10 2648276 2648396 + -
gma-MIR396c MI0010572 None chr13 45239131 45239247 + -
gma-MIR167e MI0010725 None chr20 39002092 39002200 + -
gma-MIR167f MI0010726 None chr10 47144841 47144949 - -
gma-MIR172c MI0010727 None chr18 2979182 2979334 + -
gma-MIR172d MI0010728 None chr14 5659819 5659968 + -
gma-MIR172e MI0010729 None chr11 31482550 31482702 - -
osa-MIR2118a MI0011251 0 Chr4 21642923 21643101 - -
osa-MIR2118b MI0011252 1 Chr4 21645285 21645463 - -
osa-MIR2118c MI0011253 0 Chr4 21647968 21648064 - -
osa-MIR2118d MI0011254 0 Chr4 21647689 21647864 - -
osa-MIR2118e MI0011255 0 Chr4 21647428 21647604 - -
osa-MIR2118f MI0011256 1 Chr4 21650514 21650682 - -
osa-MIR2118g MI0011257 1 Chr4 21650301 21650460 - -
osa-MIR2118h MI0011258 0 Chr4 21652652 21652808 - -
osa-MIR2118i MI0011259 0 Chr4 21652388 21652568 - -
osa-MIR2118j MI0011260 0 Chr4 21654594 21654764 - -
osa-MIR2118k MI0011261 0 Chr4 21656944 21657120 - -
osa-MIR2118l MI0011262 0 Chr4 21656708 21656884 - -
osa-MIR2118m MI0011263 1 Chr4 21658851 21659020 - -
osa-MIR2118n MI0011264 3 Chr4 21661494 21661672 - -
osa-MIR2118o MI0011265 4 Chr4 21661272 21661426 - -
osa-MIR2118p MI0011266 0 Chr11 7807433 7807606 - -
osa-MIR2118q MI0011267 0 Chr11 7810709 7810885 - -
osa-MIR2118r MI0011268 1 Chr11 7810223 7810397 - -
osa-MIR396g MI0013047 1122 Chr6 5300630 5300810 - -
osa-MIR396h MI0013048 1122 Chr2 32841661 32841801 + -
osa-MIR396d MI0013049 1542 None None -
gma-MIR396d MI0016503 None chr17 8782240 8782347 - -
gma-MIR167g MI0016548 None chr10 39602156 39602233 + -
gma-MIR156f MI0016559 None chr2 47699715 47699820 - -
gma-MIR169d MI0016571 None chr15 14186946 14187033 + -
gma-MIR172f MI0016574 None chr11 26905395 26905527 + -
gma-MIR169e MI0016576 None chr15 14210033 14210152 + -
gma-MIR156g MI0016580 None chr19 8868796 8868913 - -
gma-MIR159d MI0016581 None None None -
gma-MIR396e MI0016586 None chr17 35037484 35037597 - -
gma-MIR156h MI0017819 None chr4 5047205 5047294 - -
gma-MIR156i MI0017820 None chr5 41728607 41728736 + -
gma-MIR160b MI0017821 None chr20 41668766 41668855 + -
gma-MIR160c MI0017822 None chr19 43999110 43999200 - -
gma-MIR160d MI0017823 None chr13 25235556 25235646 - -
gma-MIR160e MI0017824 None chr3 39255811 39255900 - -
gma-MIR164b MI0017826 None chr10 1558481 1558570 + -
gma-MIR164c MI0017827 None chr3 5194846 5194935 - -
gma-MIR164d MI0017828 None chr10 38618021 38618110 + -
gma-MIR166c MI0017829 None chr7 4502830 4502959 - -
gma-MIR166d MI0017830 None chr20 44227240 44227349 - -
gma-MIR166e MI0017831 None chr4 47978621 47978730 + -
gma-MIR166f MI0017832 None chr10 41798829 41798938 + -
gma-MIR166g MI0017833 None chr10 2913323 2913432 - -
gma-MIR166h MI0017834 None chr8 14920990 14921179 + -
gma-MIR168b MI0017835 None chr1 48944581 48944690 - -
gma-MIR169f MI0017836 None chr10 40892477 40892646 - -
gma-MIR169g MI0017837 None chr17 4591798 4591927 - -
gma-MIR398c MI0017847 None chr8 14229061 14229170 - -
gma-MIR2118a MI0017849 None chr20 36443544 36443713 + -
gma-MIR2118b MI0017850 None chr10 49169712 49169821 - -
gma-MIR169h MI0017912 None chr9 5330689 5330839 + -
gma-MIR167h MI0017914 None chr10 47144854 47144942 + -
gma-MIR169i MI0017918 None chr13 21505359 21505509 + -
gma-MIR396f MI0017919 None chr15 556336 556486 - -
gma-MIR396g MI0017921 None None None -
gma-MIR167i MI0017926 None chr20 39002038 39002188 - -
gma-MIR156j MI0018651 None chr2 7901956 7902058 + -
gma-MIR156k MI0018652 None chr6 4705086 4705177 - -
gma-MIR156l MI0018653 None chr7 9384146 9384266 + -
gma-MIR156m MI0018654 None chr9 40437756 40437870 - -
gma-MIR156n MI0018655 None chr14 10456738 10456826 - -
gma-MIR156o MI0018656 None chr17 37469976 37470065 + -
gma-MIR159e MI0018657 None chr7 9561934 9562144 - -
gma-MIR159f MI0018658 None chr16 2819636 2819815 - -
gma-MIR166i MI0018660 None chr2 14544488 14544584 + -
gma-MIR166j MI0018661 None chr15 3706979 3707146 - -
gma-MIR169j MI0018662 None chr2 43801693 43801777 - -
gma-MIR169k MI0018663 None chr9 5312564 5312668 + -
gma-MIR169l MI0018664 None chr14 5435482 5435595 + -
gma-MIR169m MI0018665 None chr13 21492366 21492488 + -
gma-MIR169n MI0018666 None chr15 14166062 14166176 + -
gma-MIR172g MI0018668 None chr10 31996846 31996959 - -
gma-MIR172h MI0018669 None chr10 44054389 44054479 + -
gma-MIR172i MI0018670 None chr15 2892841 2893001 - -
gma-MIR172j MI0018671 None chr20 42009499 42009588 - -
gma-MIR396h MI0018679 None chr14 13772743 13772890 + -
gma-MIR396i MI0018680 None chr17 8774041 8774175 + -
gma-MIR167j MI0018686 None chr20 45890458 45890535 + -
gma-MIR156p MI0019741 None chr11 462200 462299 - -
gma-MIR172k MI0019746 None chr12 33517484 33517617 + -
gma-MIR156q MI0019748 None chr13 22074983 22075087 + -
gma-MIR172l MI0019750 None chr13 43075243 43075420 + -
gma-MIR169o MI0019751 None chr13 21496986 21497084 + -
gma-MIR169p MI0019756 None chr15 14192081 14192178 + -
gma-MIR156r MI0019757 None chr16 6633951 6634116 + -
gma-MIR396j MI0019759 None chr16 31530670 31530803 - -
gma-MIR156s MI0019761 None chr17 4021217 4021350 - -
gma-MIR169r MI0019762 None chr17 4587059 4587161 - -
gma-MIR169s MI0019763 None chr17 4594138 4594257 - -
gma-MIR396k MI0019764 None None None -
gma-MIR166k MI0019768 None chr19 36827774 36827945 - -
gma-MIR156t MI0019770 None chr1 56198440 56198539 + -
gma-MIR169t MI0019778 None chr5 38544108 38544233 + -
gma-MIR166l MI0019780 None chr6 45680685 45680863 - -
gma-MIR166m MI0019792 None chr9 36469526 36469701 + -
gma-MIR169u MI0019794 None chr9 45847295 45847435 - -
gma-MIR156u MI0021674 None chr2 38792955 38793054 + -
gma-MIR156v MI0021675 None chr4 4306348 4306451 + -
gma-MIR156w MI0021676 None chr6 4047089 4047194 + -
gma-MIR156x MI0021677 None chr14 9223981 9224092 + -
gma-MIR156y MI0021678 None chr17 38139717 38139822 - -
gma-MIR156z MI0021679 None chr7 5432656 5432842 - -
gma-MIR156aa MI0021680 None chr16 2833375 2833561 - -
gma-MIR156ab MI0021681 None chr7 5415191 5415378 + -
gma-MIR160f MI0021682 None chr10 4750208 4750304 - -
gma-MIR164e MI0021683 None chr2 1535426 1535520 + -
gma-MIR164f MI0021684 None chr3 43533079 43533181 + -
gma-MIR164g MI0021685 None chr3 44895293 44895384 + -
gma-MIR164h MI0021686 None chr9 49456787 49456944 - -
gma-MIR164i MI0021687 None chr18 49506475 49506631 + -
gma-MIR164j MI0021688 None chr19 48278744 48278831 + -
gma-MIR164k MI0021689 None chr20 46912450 46912558 - -
gma-MIR166n MI0021690 None chr5 38037266 38037408 - -
gma-MIR166o MI0021691 None chr6 13019417 13019561 - -
gma-MIR166p MI0021692 None chr3 37501582 37501703 - -
gma-MIR166q MI0021693 None chr4 47978878 47979029 + -
gma-MIR166r MI0021694 None KQ474607.1 1988 2142 - -
gma-MIR166s MI0021695 None chr7 10246809 10246932 + -
gma-MIR166t MI0021696 None chr9 39698809 39698944 - -
gma-MIR166u MI0021697 None chr4 33862799 33862939 + -
gma-MIR169v MI0021699 None chr13 15982021 15982322 - -
gma-MIR398d MI0031005 None chr2 46102354 46102462 + -
gma-MIR167k MI0031050 None chr2 307525 307604 - -
gma-MIR167l MI0033446 None chr3 37301792 37301901 + -
gma-MIR169w MI0033468 None chr9 5348169 5348283 + -



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