Stem-loop gma-MIR164i

Accession

MI0021687

Description

Glycine max gma-MIR164i precursor miRNA

Literature search

18 open access papers mention gma-MIR164i
(38 sentences)

Sequence

249662 reads, 835.0 reads per million, 178 experiments

uugugcaagaUGGAGAAGCAGGGCACGUGCAauacuaacucaugaacacuacacggggcgugaacucggagaaucauauucucuucugcuucauuucaccaacaagagagauccuauuaguuaguucuuCAUGUGCCCCUCUUCCCCAUCaugacaa
.(((.((.(((((.((((..(((((((((....(((((((.(((..........((((((.((....(((((((...))))))))))))))).((((........)))).....))).)))))))....)))))))))..)))).))))).))))).

Structure

u   g  a     A    CA         CAau       c   ------------aacacuacac      u  acuc       c 
 ugu ca gaUGG GAAG  GGGCACGUG    acuaacu aug                      ggggcg ga    ggagaau  
 ||| || ||||| ||||  |||||||||    ||||||| |||                      |||||| ||    ||||||| a
 aca gu CUACC CUUC  CCCGUGUAC    ugauuga uau                      cuucgu cu    ucucuua  
a   -  a     C    UC         uucu       u   ccuagagagaacaaccacuuua      -  ----       u 

Annotation confidence High

Genome context

chr18: 49506475-49506631 [+]

Mature gma-miR164i-5p

• Accession: MIMAT0024893
• Description: Glycine max gma-miR164i-5p mature miRNA
• Sequence: 11 - UGGAGAAGCAGGGCACGUGCA - 31
• Evidence: experimental ; Illumina [1]

Mature gma-miR164i-3p

• Accession: MIMAT0054375
• Description: Glycine max gma-miR164i-3p mature miRNA
• Sequence: 130 - CAUGUGCCCCUCUUCCCCAUC - 150
• Evidence: experimental ; unknown

References

1. PubMed ID: 22559273
   Genome organization and characteristics of soybean microRNAs
   Turner M, Yu O, Subramanian S
   BMC Genomics (2012) 13:169