Accession
MI0000654
Description
Oryza sativa
osa-MIR156b precursor miRNA
Literature search
122 open access papers mention osa-MIR156b
(666 sentences)
(666 sentences)
Sequence
8005281
reads,
30353.0
reads per million, 142 experiments
uugucuugagaggggaagagaucucuauggguuuuggaggucUGACAGAAGAGAGUGAGCACAcacggugcuuucuuagcaugcaagagccaugcugggagcugugcguGCUCACUCUCUAUCUGUCAGCCguucaccaugcccaauaugauuaaucuccuucucucaguugacag
.((((((((((((((.(((((((....(((((..((((((.(((((((((((((((((((((.((((((....(((((((((((....).)))))))))))))))).))))))))))))).)))))))))).))))....)))))....))))..))).))))))))))..)))).
.((((((((((((((.(((((((....(((((..((((((.(((((((((((((((((((((.((((((....(((((((((((....).)))))))))))))))).))))))))))))).)))))))))).))))....)))))....))))..))).))))))))))..)))).
Structure
u -- a -- ucua --uu - u - A gcuu - a uguc uugagagggg aga gauc ugggu ugga gg cUGACAGA AGAGAGUGAGCAC cacggu ucuuagcaug c a |||| |||||||||| ||| |||| ||||| |||| || |||||||| ||||||||||||| |||||| |||||||||| | acag gacucucuuc ucu uuag acccg acuu CC GACUGUCU UCUCUCACUCGug gugucg agggucguac g g g uu c aa uaua uacc g - A c ---- c a
Annotation confidence
High
Do you think this miRNA is real?
Genome context
1: 4666341-4666516 [+]
Clustered miRNAs
1 other miRNA is < 10 kb from osa-MIR156b
| Name | Accession | Chromosome | Start | End | Strand | Confidence |
|---|
Database links
Mature osa-miR156b-5p
| Accession | MIMAT0000619 |
| Description | Oryza sativa osa-miR156b-5p mature miRNA |
| Sequence | 43 - UGACAGAAGAGAGUGAGCACA - 63 |
| Evidence | not_experimental |
| Database links |
|
Mature osa-miR156b-3p
| Accession | MIMAT0022845 |
| Description | Oryza sativa osa-miR156b-3p mature miRNA |
| Sequence | 110 - GCUCACUCUCUAUCUGUCAGCC - 131 |
| Evidence |
experimental
Illumina [2] |
| Database links |
|
References
|
