Viral infection induces expression of novel phased microRNAs from conserved cellular microRNA precursors |
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PubMed ID | 21901091 |
Authors | Du P, Wu J, Zhang J, Zhao S, Zheng H, Gao G, Wei L, Li Y |
Journal | PLoS Pathog |
Volume | 7 |
Pages | e1002176 |
Name | Accession | RPM | Chromosome | Start | End | Strand | Confidence |
---|---|---|---|---|---|---|---|
osa-MIR156b | MI0000654 | 258339 | Chr1 | 4666341 | 4666516 | + | High |
osa-MIR156c | MI0000655 | 258287 | Chr1 | 4665975 | 4666123 | + | High |
osa-MIR156f | MI0000658 | 374943 | Chr8 | 21478230 | 21478415 | + | High |
osa-MIR156g | MI0000659 | 258296 | Chr9 | 15065253 | 15065368 | + | High |
osa-MIR156h | MI0000660 | 374943 | Chr8 | 21491232 | 21491417 | + | High |
osa-MIR156j | MI0000662 | 374978 | Chr6 | 26554795 | 26554959 | + | High |
osa-MIR160a | MI0000663 | 392 | Chr2 | 3511585 | 3511672 | - | High |
osa-MIR160b | MI0000664 | 392 | Chr6 | 28081020 | 28081158 | + | High |
osa-MIR160c | MI0000665 | 321 | Chr8 | 1707568 | 1707666 | + | High |
osa-MIR160d | MI0000666 | 299 | Chr3 | 32454988 | 32455129 | + | - |
osa-MIR166a | MI0000670 | 19323 | Chr10 | 19987135 | 19987279 | + | High |
osa-MIR166b | MI0000671 | 19371 | Chr6 | 30327084 | 30327289 | - | High |
osa-MIR166c | MI0000672 | 19151 | Chr3 | 3487788 | 3487912 | + | High |
osa-MIR166d | MI0000673 | 19377 | Chr2 | 26130059 | 26130183 | + | High |
osa-MIR166e | MI0000674 | 36 | Chr3 | 765724 | 765860 | + | - |
osa-MIR167c | MI0000678 | 55830 | Chr3 | 33130619 | 33130781 | + | - |
osa-MIR396a | MI0001046 | 97 | Chr2 | 34280384 | 34280537 | + | - |
osa-MIR396b | MI0001047 | 100 | Chr6 | 3669649 | 3669764 | + | - |
osa-MIR396c | MI0001048 | 280 | Chr2 | 34287873 | 34288013 | - | High |
osa-MIR156l | MI0001091 | 10220 | Chr5 | 5230609 | 5230764 | + | High |
osa-MIR160e | MI0001100 | 284 | Chr7 | 2216761 | 2216874 | - | - |
osa-MIR160f | MI0001101 | 73 | Chr8 | 24396882 | 24396981 | + | - |
osa-MIR166k | MI0001107 | 1477 | Chr2 | 32435003 | 32435129 | - | High |
osa-MIR166l | MI0001108 | 1522 | Chr9 | 16951817 | 16951933 | + | High |
osa-MIR167d | MI0001109 | 56522 | Chr7 | 4166295 | 4166404 | - | - |
osa-MIR167e | MI0001110 | 56102 | Chr2 | 3742241 | 3742513 | - | High |
osa-MIR167h | MI0001113 | 56418 | Chr12 | 25480618 | 25480737 | + | - |
osa-MIR167i | MI0001114 | 56192 | Chr6 | 27674749 | 27674949 | + | High |
osa-MIR171c | MI0001134 | 391 | Chr4 | 31713472 | 31713570 | - | High |
osa-MIR171d | MI0001135 | 369 | Chr10 | 21237313 | 21237447 | + | High |
osa-MIR171e | MI0001136 | 369 | Chr3 | 1970487 | 1970605 | + | High |
osa-MIR171f | MI0001137 | 354 | Chr3 | 30027774 | 30027900 | + | - |
osa-MIR166g | MI0001142 | 19256 | Chr12 | 18329367 | 18329511 | + | - |
osa-MIR166h | MI0001143 | 17849 | Chr2 | 32435174 | 32435292 | - | High |
osa-MIR166i | MI0001144 | 443 | Chr3 | 25294953 | 25295097 | + | - |
osa-MIR408 | MI0001149 | 581 | Chr1 | 12301661 | 12301873 | + | High |
osa-MIR172d | MI0001154 | 3505 | Chr2 | 35143537 | 35143666 | - | High |
osa-MIR171i | MI0001155 | 92 | Chr3 | 21191603 | 21191722 | + | High |
osa-MIR166j | MI0001158 | 19511 | None | None | - | ||
osa-MIR390 | MI0001690 | 337 | Chr3 | 34275140 | 34275230 | - | High |
osa-MIR528 | MI0003201 | 4611 | Chr3 | 1667328 | 1667415 | + | - |
osa-MIR535 | MI0003505 | 3861 | Chr11 | 16290530 | 16290623 | - | - |
osa-MIR1432 | MI0006972 | 629 | Chr7 | 23401702 | 23401810 | - | - |
osa-MIR156a | MI0000653 | 257272 | Chr1 | 22524147 | 22524246 | - | - |
osa-MIR156d | MI0000656 | 375099 | Chr2 | 4512884 | 4513012 | - | - |
osa-MIR156e | MI0000657 | 257257 | Chr4 | 25026327 | 25026430 | - | - |
osa-MIR156i | MI0000661 | 257274 | Chr2 | 24119995 | 24120084 | - | - |
osa-MIR164a | MI0000668 | 1892 | Chr7 | 28523341 | 28523496 | - | - |
osa-MIR164b | MI0000669 | 1921 | Chr5 | 15896163 | 15896271 | - | - |
osa-MIR166f | MI0000675 | 19281 | Chr10 | 14483290 | 14483396 | - | - |
osa-MIR167a | MI0000676 | 55831 | Chr12 | 25476808 | 25476948 | + | High |
osa-MIR167b | MI0000677 | 55818 | Chr3 | 30546928 | 30547090 | - | - |
osa-MIR171a | MI0000680 | 7 | Chr6 | 25891132 | 25891227 | + | - |
osa-MIR393a | MI0001026 | 98 | Chr1 | 2309149 | 2309263 | - | - |
osa-MIR394 | MI0001027 | 78 | Chr2 | 27148154 | 27148263 | + | - |
osa-MIR156k | MI0001090 | 871 | Chr9 | 18289107 | 18289212 | - | - |
osa-MIR159a | MI0001092 | 1717 | Chr1 | 17681923 | 17682194 | + | - |
osa-MIR159b | MI0001093 | 1371 | Chr1 | 1215030 | 1215217 | + | - |
osa-MIR159c | MI0001094 | 62 | Chr1 | 6556048 | 6556244 | - | - |
osa-MIR159d | MI0001095 | 44 | Chr1 | 6563756 | 6563944 | - | - |
osa-MIR159e | MI0001096 | 46 | Chr1 | 9760708 | 9760898 | - | - |
osa-MIR159f | MI0001097 | 83 | Chr1 | 6693112 | 6693299 | + | - |
osa-MIR319a | MI0001098 | 527 | Chr1 | 26823282 | 26823472 | - | - |
osa-MIR319b | MI0001099 | 227 | Chr1 | 6677570 | 6677766 | - | - |
osa-MIR164c | MI0001103 | 8 | Chr5 | 17327440 | 17327558 | + | - |
osa-MIR164d | MI0001104 | 2213 | Chr2 | 33143567 | 33143660 | - | - |
osa-MIR164e | MI0001105 | 1894 | Chr3 | 10542157 | 10542288 | + | - |
osa-MIR167f | MI0001111 | 56422 | Chr10 | 14723044 | 14723156 | - | - |
osa-MIR167g | MI0001112 | 56505 | Chr3 | 3347682 | 3347763 | + | High |
osa-MIR168a | MI0001115 | 282915 | Chr2 | 1553154 | 1553240 | - | High |
osa-MIR168b | MI0001116 | 1 | Chr2 | 27336428 | 27336533 | + | - |
osa-MIR171b | MI0001133 | 363 | Chr8 | 5369153 | 5369252 | + | - |
osa-MIR171g | MI0001138 | 9 | Chr7 | 15636744 | 15636832 | - | - |
osa-MIR172a | MI0001139 | 3477 | Chr9 | 22881834 | 22881942 | + | - |
osa-MIR172b | MI0001140 | 201 | Chr1 | 42923736 | 42923973 | - | - |
osa-MIR172c | MI0001141 | 199 | Chr7 | 13111485 | 13111595 | - | - |
osa-MIR171h | MI0001147 | 61 | Chr4 | 28482456 | 28482556 | + | - |
osa-MIR393b | MI0001148 | 216 | Chr4 | 34931876 | 34932007 | - | High |
osa-MIR167j | MI0001156 | 56523 | Chr1 | 32686068 | 32686227 | - | - |
osa-MIR166m | MI0001157 | 17946 | Chr8 | 23045356 | 23045555 | + | - |
osa-MIR164f | MI0001159 | 1904 | Chr5 | 23343908 | 23344117 | + | - |
osa-MIR396e | MI0001703 | 1338 | Chr4 | 34436820 | 34437003 | + | High |
osa-MIR1425 | MI0006965 | 1196 | Chr5 | 8862149 | 8862250 | + | High |
osa-MIR444b | MI0006974 | 2333 | None | None | - | ||
osa-MIR1863a | MI0008264 | 310 | Chr2 | 8521746 | 8522119 | + | - |
osa-MIR396f | MI0010563 | 1410 | Chr2 | 35636546 | 35636721 | - | High |
osa-MIR1863c | MI0013044 | 87 | Chr12 | 4869207 | 4869497 | + | - |
osa-MIR396g | MI0013047 | 1122 | Chr6 | 5300630 | 5300810 | - | - |
osa-MIR396h | MI0013048 | 1122 | Chr2 | 32841661 | 32841801 | + | - |
osa-MIR396d | MI0013049 | 1542 | None | None | - | ||
osa-MIR1863b | MI0013050 | 69 | Chr12 | 4867257 | 4867616 | + | - |