Stem-loop osa-MIR156e

Accession

MI0000657

Description

Oryza sativa osa-MIR156e precursor miRNA

Literature search

119 open access papers mention osa-MIR156e
(655 sentences)

Sequence

372260 reads, 257250 reads per million, 2 experiments

ggcgcgaggUGACAGAAGAGAGUGAGCACacggccgggcgugacggcaccggcgggcgugccgucgcggccgcgugcucacugcucuuucugucauccggugcc
(((((..((((((((((((((((((((((.(((((....(((((((((((.....).))))))))))))))).))))))))).))).))))))))))..)))))

Structure

     ga          -   -         a     gggc          - g 
ggcgc  ggUGACAGAA GAG AGUGAGCAC cggcc    gugacggcac c g
|||||  |||||||||| ||| ||||||||| |||||    |||||||||| | c
ccgug  cuacugucuu cuc ucacucgug gccgg    cgcugccgug g g
     gc          u   g         c     ----          c g 

Annotation confidence Not enough data

Comments

The stem-loop sequence represented here is predicted based on homology to miRNAs cloned from Arabidopsis [1]. Its expression has not been verified in rice.

Genome context

Chr4: 25026327-25026430 [-]

Mature osa-miR156e

• Accession: MIMAT0000622
• Description: Oryza sativa osa-miR156e mature miRNA
• Sequence: 10 - UGACAGAAGAGAGUGAGCAC - 29
• Evidence: not_experimental

References

1. PubMed ID: 12101121
   MicroRNAs in plants
   "Reinhart BJ, Weinstein EG, Rhoades MW, Bartel B, Bartel DP"
   "Genes Dev (2002) 16:1616-1626