Stem-loop osa-MIR167j

Accession

MI0001156

Description

Oryza sativa osa-MIR167j precursor miRNA

Literature search

83 open access papers mention osa-MIR167j
(244 sentences)

Sequence

23474717 reads, 84397.0 reads per million, 142 experiments

uugugaugugugcaccuuaagcagcUGAAGCUGCCAGCAUGAUCUGAUCuuuugcgaucucuuuuuuuaucugaauaaguugauggaaauauuggguuccuaagauucAGAUCGUGCUGCGCAGUUUCAUCUGcuaaucgaugcacuacacugugaauuu
..(((.((.((((((..(.(((((.((((((((((((((((((((((((((..(.((.(((..((((((((..........))))))))....))).))).)))).))))))))))))).))))))))).))))).)..).)))))))))).........

Structure

-------uu   a  u     - cu a     c         -             -    uu c  u   --uu        ugaa 
         gug ug gugca c  u agcag UGAAGCUGC CAGCAUGAUCUGA UCuu  g ga cuc    uuuuuauc    u
         ||| || ||||| |  | ||||| ||||||||| ||||||||||||| ||||  | || |||    ||||||||     
         cac au cacgu g  a ucGUC ACUUUGACG GUCGUGCUAGAcu agaa  c cu ggg    aaagguag    a
uuuaagugu   -  -     a cu a     U         C             u    -u -  u   uuau        uuga 

Annotation confidence High

Genome context

1: 32686068-32686227 [-]

Mature osa-miR167j-5p

• Accession: MIMAT0001086
• Description: Oryza sativa osa-miR167j-5p mature miRNA
• Sequence: 26 - UGAAGCUGCCAGCAUGAUCUGAUC - 49
• Evidence: not_experimental

Mature osa-miR167j-3p

• Accession: MIMAT0055975
• Description: Oryza sativa osa-miR167j-3p mature miRNA
• Sequence: 109 - AGAUCGUGCUGCGCAGUUUCAUCUG - 133
• Evidence: experimental ; unknown

References

1. PubMed ID: 15685364
   Computational identification of novel family members of microRNA genes in Arabidopsis thaliana and Oryza sativa
   "Li Y, Li W, Jin YX"
   "Acta Biochim Biophys Sin (Shanghai) (2005) 37:75-87