Accession
MI0001093
Description
Oryza sativa
osa-MIR159b precursor miRNA
Gene family
MIPF0000010;
MIR159
Literature search
77 open access papers mention osa-MIR159b
(364 sentences)
(364 sentences)
Sequence
1949
reads,
1371
reads per million, 2 experiments
gguuaugaaguggagcuccuuucguuccaaugaaagguuuaucugaagggugauacagcugcuuguucaugguucccacuauucuaucucauaggaaaagagauaggcuugugguuugcaugaccaaggagccgaaucaacuccuugcugaccacucUUUGGAUUGAAGGGAGCUCUGcaucuugauc
(((((.((.(((((((((((((((.(((((.((..((((......(((((((((.(.(((.((((.(((((....((((...((((((((.........))))))))...))))....))))).)))).))).).))).)).))))...))))..)).))))).))))))))))))))).)).)))))
(((((.((.(((((((((((((((.(((((.((..((((......(((((((((.(.(((.((((.(((((....((((...((((((((.........))))))))...))))....))))).)))).))).).))).)).))))...))))..)).))))).))))))))))))))).)).)))))
Structure
u a u u aa uaucug - - a a g u guuc uau aua
gguua ga guggagcuccuuucg uccaa ga gguu aagg gu gau c gcu cuug ucaug ccac ucuaucuc g
||||| || ||||||||||||||| ||||| || |||| |||| || ||| | ||| |||| ||||| |||| |||||||| g
cuagu cu cGUCUCGAGGGAAGU AGGUU cu ccag uucc ca cua g cga gaac aguac ggug ggauagag a
u a U U ca ---ucg u a a c g c guuu uuc aaa
Annotation confidence
Not enough data
Do you think this miRNA is real?
Comments
This sequence is a predicted paralogue of the previously identified miR159/JAW family [1]. It is predicted to target mRNAs coding for MYB and TCP transcription factors.
Genome context
Chr1: 1215030-1215217 [+]
Database links
Mature osa-miR159b
| Accession | MIMAT0001023 |
| Description | Oryza sativa osa-miR159b mature miRNA |
| Sequence | 158 - UUUGGAUUGAAGGGAGCUCUG - 178 |
| Evidence | not_experimental |
| Database links |
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References
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