Stem-loop osa-MIR156i

Accession

MI0000661

Description

Oryza sativa osa-MIR156i precursor miRNA

Gene family

MIPF0000008; MIR156

Literature search

119 open access papers mention osa-MIR156i
(652 sentences)

Sequence

372279 reads, 257274 reads per million, 2 experiments

ggUGACAGAAGAGAGUGAGCACacggccgggcggaacggcaccggcggaugugccgucgcggccgcgugcucacugcucugucugucauc
((((((((((((((((((((((.((((((.(....(((((((........)))))))).)))))).))))))))).)))).)))))))))

Structure

         -    -         a      g cgga       cgg 
ggUGACAGA AGAG AGUGAGCAC cggccg g    acggcac   c
||||||||| |||| ||||||||| |||||| |    |||||||    
cuacugucu ucuc ucacucgug gccggc c    ugccgug   g
         g    g         c      g ----       uag 

Annotation confidence Not enough data

Comments

The stem-loop sequence represented here is predicted based on homology to miRNAs cloned from Arabidopsis [1]. Its expression has not been verified in rice.

Genome context

Chr2: 24119995-24120084 [-]

Mature osa-miR156i

• Accession: MIMAT0000626
• Description: Oryza sativa osa-miR156i mature miRNA
• Sequence: 3 - UGACAGAAGAGAGUGAGCAC - 22
• Evidence: not_experimental

References

1. PubMed ID: 12101121
   MicroRNAs in plants
   "Reinhart BJ, Weinstein EG, Rhoades MW, Bartel B, Bartel DP"
   "Genes Dev (2002) 16:1616-1626